Gene: AL5G31530 (Arabidopsis lyrata)

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Gene Identifier
AL5G31530
Transcript Identifier
AL5G31530.1
Gene Type
Coding gene
Location
scaffold_5 : 20051075-20052886 : negative

Family

Gene family
HOM03D003903
(48 genes in 31 species)
specific family
Subfamily
ORTHO03D002256
(43 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Proteasome subunit beta type-1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid939125
GeneNameg939125
idPAC:16048748

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051603IEAGenome Projectproteolysis involved in cellular protein catabolic process
GO:0009817ISOPLAZA Integrative Orthologydefense response to fungus, incompatible interactionAT3G60820
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT3G60820

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004298IEAGenome Projectthreonine-type endopeptidase activity
GO:0004175IEAInterProendopeptidase activity
GO:0070003IEAPLAZA Homologythreonine-type peptidase activityHOM03D003903

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005839IEAGenome Projectproteasome core complex
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G60820
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT3G60820
GO:0000502ISOPLAZA Integrative Orthologyproteasome complexAT3G60820
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G60820
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G60820

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016050Proteasome beta-type subunit, conserved site
IPR001353Proteasome, subunit alpha/beta
IPR023333Proteasome B-type subunit

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.