PLAZA 3.0 Dicots gene overview : AL5G16800

Gene: AL5G16800 (Arabidopsis lyrata)

Overview

Gene Identifier: AL5G16800
Transcript Identifier: AL5G16800.1
Gene Type: Coding gene
Location: scaffold_5 : 13568571-13571423 : negative

Family

Gene family: HOM03D000179
(570 genes in 31 species)
specific family
Subfamily: ORTHO03D000127
(159 genes in 30 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

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Descriptions

Description (AnnoMine): Aldehyde dehydrogenase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	485161
GeneName	g485161
id	PAC:16049311

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000179
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03D000179
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT3G48000

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016491	IEA	Genome Project	oxidoreductase activity
GO:0016620	IEA	InterPro	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016903	IEA	PLAZA Homology	oxidoreductase activity, acting on the aldehyde or oxo group of donors	HOM03D000179
GO:0005524	ISO	PLAZA Integrative Orthology	ATP binding	AT3G48000

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT3G48000
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT3G48000

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016161	Aldehyde/histidinol dehydrogenase
IPR016160	Aldehyde dehydrogenase, conserved site
IPR015590	Aldehyde dehydrogenase domain
IPR016163	Aldehyde dehydrogenase, C-terminal
IPR016162	Aldehyde dehydrogenase, N-terminal

Mapman id	Description
5.10	fermentation.aldehyde dehydrogenase

No SignalP domains detected for this gene.