Gene: AL5G16790 (Arabidopsis lyrata)

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Gene Identifier
AL5G16790
Transcript Identifier
AL5G16790.1
Gene Type
Coding gene
Location
scaffold_5 : 13564378-13567078 : negative

Family

Gene family
HOM03D002229
(78 genes in 30 species)
specific family
Subfamily
ORTHO03D002185
(43 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
protein ligase SIS3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid485160
GeneNameg485160
idPAC:16054540

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT3G47990
GO:0010182ISOPLAZA Integrative Orthologysugar mediated signaling pathwayAT3G47990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G47990

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.