Gene: AL5G13780 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL5G13780
Transcript Identifier
AL5G13780.1
Gene Type
Coding gene
Location
scaffold_5 : 12094049-12098434 : negative

Family

Gene family
HOM03D002048
(83 genes in 29 species)
specific family
Subfamily
ORTHO03D013036
(18 genes in 13 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
CCR4-NOT transcription complex subunit 4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid484947
GeneNameg484947
idPAC:16054262

Toolbox

Explore

View

 

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0005515IEAInterProprotein binding
GO:0000166IEAInterPronucleotide binding
GO:0008270IEAInterProzinc ion binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D002048

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G45630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR012677Nucleotide-binding, alpha-beta plait
IPR003954RNA recognition motif domain, eukaryote
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR000504RNA recognition motif domain

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.