Gene: AL4G28300 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL4G28300
Transcript Identifier
AL4G28300.1
Gene Type
Coding gene
Location
scaffold_4 : 20150552-20151937 : positive

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family
Subfamily
ORTHO03D026344
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
directed RNA polymerases IV and V subunit 5B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid483204
GeneNameg483204
idPAC:16048059

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAGenome Projecttranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003899IEAGenome ProjectDNA-directed RNA polymerase activity
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000419ISOPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT2G41340
GO:0000418ISOPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT2G41340

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005571RNA polymerase, Rpb5, N-terminal
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.