Gene: AL4G28050 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL4G28050
Transcript Identifier
AL4G28050.1
Gene Type
Coding gene
Location
scaffold_4 : 20031187-20032087 : positive

Family

Gene family
HOM03D000053
(1435 genes in 31 species)
specific family
Subfamily
ORTHO03D046117
(3 genes in 3 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Calmodulin-like protein 12
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid934929
GeneNameg934929
idPAC:16063124

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009646ISOPLAZA Integrative Orthologyresponse to absence of lightAT2G41100
GO:0009652ISOPLAZA Integrative OrthologythigmotropismAT2G41100
GO:0009612ISOPLAZA Integrative Orthologyresponse to mechanical stimulusAT2G41100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005509IEAInterProcalcium ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G41100
GO:0043169IEAPLAZA Homologycation bindingHOM03D000053
GO:0005488IEAPLAZA HomologybindingHOM03D000053
GO:0043167IEAPLAZA Homologyion bindingHOM03D000053
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000053

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT2G41100
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT2G41100

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011992EF-hand domain pair
IPR002048EF-hand domain
IPR018247EF-Hand 1, calcium-binding site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.