Gene: AL4G27690 (Arabidopsis lyrata)

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Gene Identifier
AL4G27690
Transcript Identifier
AL4G27690.1
Gene Type
Coding gene
Location
scaffold_4 : 19883153-19890923 : negative

Family

Gene family
HOM03D003402
(53 genes in 29 species)
specific family
Subfamily
ORTHO03D003650
(37 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
protein ligase SHPRH
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid483135
GeneNameg483135
idPAC:16034716

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004386IEAGenome Projecthelicase activity
GO:0005515IEAGenome Projectprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0046872IEAInterPrometal ion binding

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001841Zinc finger, RING-type
IPR018957Zinc finger, C3HC4 RING-type
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR001965Zinc finger, PHD-type
IPR013026Tetratricopeptide repeat-containing domain
IPR001650Helicase, C-terminal
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011011Zinc finger, FYVE/PHD-type
IPR019786Zinc finger, PHD-type, conserved site
IPR000330SNF2-related

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBPHD