Gene: AL4G27230 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL4G27230
Transcript Identifier
AL4G27230.1
Gene Type
Coding gene
Location
scaffold_4 : 19713039-19715433 : negative

Family

Gene family
HOM03D000091
(1046 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Laccase-12/13
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid934840
GeneNameg934840
idPAC:16048472

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0046274IEAInterProlignin catabolic process
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000091
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000091
GO:0009698IEAPLAZA Homologyphenylpropanoid metabolic processHOM03D000091
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000091
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000091
GO:0044712IEAPLAZA Homologysingle-organism catabolic processHOM03D000091
GO:0019439IEAPLAZA Homologyaromatic compound catabolic processHOM03D000091
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000091
GO:0019748IEAPLAZA Homologysecondary metabolic processHOM03D000091
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000091
GO:0009808IEAPLAZA Homologylignin metabolic processHOM03D000091
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000091
GO:1901361IEAPLAZA Homologyorganic cyclic compound catabolic processHOM03D000091
GO:0046271IEAPLAZA Homologyphenylpropanoid catabolic processHOM03D000091
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000091
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000091

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0005507IEAGenome Projectcopper ion binding
GO:0052716IEAInterProhydroquinone:oxygen oxidoreductase activity
GO:0043169IEAPLAZA Homologycation bindingHOM03D000091
GO:0043167IEAPLAZA Homologyion bindingHOM03D000091
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000091
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000091
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000091
GO:0016679IEAPLAZA Homologyoxidoreductase activity, acting on diphenols and related substances as donorsHOM03D000091
GO:0005488IEAPLAZA HomologybindingHOM03D000091
GO:0016682IEAPLAZA Homologyoxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptorHOM03D000091

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048046IEAInterProapoplast
GO:0005576IEAPLAZA Homologyextracellular regionHOM03D000091

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017761Laccase
IPR008972Cupredoxin
IPR002355Multicopper oxidase, copper-binding site
IPR011706Multicopper oxidase, type 2
IPR011707Multicopper oxidase, type 3
IPR001117Multicopper oxidase, type 1

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network