Gene: AL4G26710 (Arabidopsis lyrata)

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Gene Identifier
AL4G26710
Transcript Identifier
AL4G26710.1
Gene Type
Coding gene
Location
scaffold_4 : 19497233-19505503 : positive

Family

Gene family
HOM03D000511
(254 genes in 31 species)
specific family
Subfamily
ORTHO03D001050
(59 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
polymerase V subunit 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid483042
GeneNameg483042
idPAC:16056724

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0009308IEAInterProamine metabolic process
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT2G40030
GO:0035194ISOPLAZA Integrative Orthologyposttranscriptional gene silencing by RNAAT2G40030
GO:0006306ISOPLAZA Integrative OrthologyDNA methylationAT2G40030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003899IEAGenome ProjectDNA-directed RNA polymerase activity
GO:0048038IEAInterProquinone binding
GO:0005507IEAInterProcopper ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G40030
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000511
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D000511
GO:0016779IEAPLAZA Homologynucleotidyltransferase activityHOM03D000511

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016604ISOPLAZA Integrative Orthologynuclear bodyAT2G40030
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT2G40030
GO:0030880ISOPLAZA Integrative OrthologyRNA polymerase complexAT2G40030
GO:0000419ISOPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT2G40030
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G40030
GO:0000418ISOPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT2G40030

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015801Copper amine oxidase, N2/N3-terminal
IPR021602Protein of unknown function DUF3223
IPR000722RNA polymerase, alpha subunit
IPR007066RNA polymerase Rpb1, domain 3
IPR006592RNA polymerase, N-terminal
IPR007081RNA polymerase Rpb1, domain 5
IPR007080RNA polymerase Rpb1, domain 1

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.