PLAZA 3.0 Dicots gene overview : AL4G23340

Gene: AL4G23340 (Arabidopsis lyrata)

Overview

Gene Identifier: AL4G23340
Transcript Identifier: AL4G23340.1
Gene Type: Coding gene
Location: scaffold_4 : 18018491-18020184 : positive

Family

Gene family: HOM03D000312
(373 genes in 29 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): H2 finger protein ATL33

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	345494
GeneName	g345494
id	PAC:16051268

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008375	IEA	Genome Project	acetylglucosaminyltransferase activity
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0016758	IEA	PLAZA Homology	transferase activity, transferring hexosyl groups	HOM03D000312
GO:0016757	IEA	PLAZA Homology	transferase activity, transferring glycosyl groups	HOM03D000312
GO:0008194	IEA	PLAZA Homology	UDP-glycosyltransferase activity	HOM03D000312
GO:0016740	IEA	PLAZA Homology	transferase activity	HOM03D000312

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR003406	Glycosyl transferase, family 14
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING

No SignalP domains detected for this gene.