Gene: AL4G10520 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL4G10520
Transcript Identifier
AL4G10520.1
Gene Type
Coding gene
Location
scaffold_4 : 10878612-10881173 : negative

Family

Gene family
HOM03D000149
(695 genes in 14 species)
specific family
Subfamily
ORTHO03D061483
(2 genes in 1 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative F-box protein At3g23960
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid344438
GeneNameg344438
idPAC:16039241

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0006511IEAGenome Projectubiquitin-dependent protein catabolic process
GO:0042631ISOPLAZA Tree-based Orthologycellular response to water deprivationAT2G31470
GO:0010119ISOPLAZA Tree-based Orthologyregulation of stomatal movementAT2G31470
GO:0009788ISOPLAZA Tree-based Orthologynegative regulation of abscisic acid-activated signaling pathwayAT2G31470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872IEAGenome Projectmetal ion binding
GO:0005515IEAGenome Projectprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT2G21930
GO:0009507ISOPLAZA Tree-based OrthologychloroplastAT2G40925 AT3G10790
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT4G19930

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001424Superoxide dismutase, copper/zinc binding domain
IPR016072SKP1 component, dimerisation
IPR013187F-box associated domain, type 3
IPR011333BTB/POZ fold
IPR001810F-box domain
IPR017451F-box associated interaction domain

Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.