Gene: AL4G04220 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL4G04220
Transcript Identifier
AL4G04220.1
Gene Type
Coding gene
Location
scaffold_4 : 2581969-2585513 : positive

Family

Gene family
HOM03D000055
(1402 genes in 29 species)
specific family
Subfamily
ORTHO03D000330
(101 genes in 24 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
myrcene/(E)-beta-ocimene synthase 2, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid932440
GeneNameg932440
idPAC:16052373

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0016106ISOPLAZA Tree-based Orthologysesquiterpenoid biosynthetic processAT4G16740
GO:0009625ISOPLAZA Tree-based Orthologyresponse to insectAT4G16740
GO:0043693ISOPLAZA Tree-based Orthologymonoterpene biosynthetic processAT3G25810
GO:0016099ISOPLAZA Tree-based Orthologymonoterpenoid biosynthetic processAT3G25820 AT3G25830 AT2G24210 SL01G105890
GO:0009753ISOPLAZA Tree-based Orthologyresponse to jasmonic acidMT4G045810 AT2G24210 AT4G16740
GO:0009611ISOPLAZA Tree-based Orthologyresponse to woundingLJ3G041280 MT4G045810 AT2G24210 AT4G16740
GO:0080027ISOPLAZA Tree-based Orthologyresponse to herbivoreLJ3G041280 MT4G045810 AT2G24210 AT4G16740

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016829IEAGenome Projectlyase activity
GO:0000287IEAGenome Projectmagnesium ion binding
GO:0010333IEAGenome Projectterpene synthase activity
GO:0052578ISOPLAZA Tree-based Orthologyalpha-farnesene synthase activityAT4G16730 AT4G16740
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT3G25810
GO:0080015ISOPLAZA Tree-based Orthologysabinene synthase activityAT3G25810
GO:0050552ISOPLAZA Tree-based Orthology(4S)-limonene synthase activityAT3G25810
GO:0050550ISOPLAZA Tree-based Orthologypinene synthase activityAT3G25810
GO:0034002ISOPLAZA Tree-based Orthology(R)-limonene synthase activityAT3G25810
GO:0050551ISOPLAZA Tree-based Orthologymyrcene synthase activityAT3G25820 AT3G25830 AT3G25810 AT2G24210 AT4G16740
GO:0034768ISOPLAZA Tree-based Orthology(E)-beta-ocimene synthase activityAT3G25820 AT3G25830 AT3G25810 AT2G24210 AT4G16730 AT4G16740
GO:0016835IEAPLAZA Homologycarbon-oxygen lyase activityHOM03D000055
GO:0043169IEAPLAZA Homologycation bindingHOM03D000055
GO:0016838IEAPLAZA Homologycarbon-oxygen lyase activity, acting on phosphatesHOM03D000055
GO:0043167IEAPLAZA Homologyion bindingHOM03D000055
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000055
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000055

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT4G16740
GO:0009570ISOPLAZA Tree-based Orthologychloroplast stromaMT4G045810

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR005630Terpene synthase, metal-binding domain
IPR001906Terpene synthase, N-terminal domain
IPR008949Terpenoid synthase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.