Gene: AL4G01260 (Arabidopsis lyrata)

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Gene Identifier
AL4G01260
Transcript Identifier
AL4G01260.1
Gene Type
Coding gene
Location
scaffold_4 : 634182-639071 : negative

Family

Gene family
HOM03D004644
(43 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
protein ligase RKP
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid481065
GeneNameg481065
idPAC:16063664

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0060154ISOPLAZA Integrative Orthologycellular process regulating host cell cycle in response to virusAT2G22010
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT2G22010
GO:0051726ISOPLAZA Integrative Orthologyregulation of cell cycleAT2G22010
GO:0009615ISOPLAZA Integrative Orthologyresponse to virusAT2G22010
GO:0030163ISOPLAZA Integrative Orthologyprotein catabolic processAT2G22010
GO:0051603ISOPLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic processAT2G22010
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D004644

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G22010

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151IEAPLAZA Homologyubiquitin ligase complexHOM03D004644

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003877SPla/RYanodine receptor SPRY
IPR018355SPla/RYanodine receptor subgroup
IPR001870B30.2/SPRY domain
IPR008985Concanavalin A-like lectin/glucanases superfamily
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001841Zinc finger, RING-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.