PLAZA 3.0 Dicots gene overview : AL3G39910

Gene: AL3G39910 (Arabidopsis lyrata)

Overview

Gene Identifier: AL3G39910
Transcript Identifier: AL3G39910.1
Gene Type: Coding gene
Location: scaffold_3 : 23003877-23005692 : negative

Family

Gene family: HOM03D002841
(64 genes in 31 species)
specific family
Subfamily: ORTHO03D001315
(53 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine): Putative eukaryotic translation initiation factor 2 subunit 3-like protein

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	343503
GeneName	g343503
id	PAC:16039768

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003924	IEA	Genome Project	GTPase activity
GO:0005525	IEA	Genome Project	GTP binding
GO:0008236	IEA	InterPro	serine-type peptidase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	InterPro	integral to membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000795	Elongation factor, GTP-binding domain
IPR009000	Translation protein, beta-barrel domain
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR019756	Peptidase S26A, signal peptidase I, serine active site
IPR015256	Translation initiation factor 2, gamma subunit, C-terminal
IPR004161	Translation elongation factor EFTu/EF1A, domain 2

Mapman id	Description
29.2.3	protein.synthesis.initiation

No SignalP domains detected for this gene.