Gene: AL3G39830 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL3G39830
Transcript Identifier
AL3G39830.1
Gene Type
Coding gene
Location
scaffold_3 : 22944814-22946055 : negative

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D002784
(40 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Putative RING-H2 finger protein ATL49
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid480768
GeneNameg480768
idPAC:16061299

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080167ISOPLAZA Tree-based Orthologyresponse to karrikinAT4G30400
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G18650

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.