PLAZA 3.0 Dicots gene overview : AL3G30460

Gene: AL3G30460 (Arabidopsis lyrata)

Overview

Gene Identifier: AL3G30460
Transcript Identifier: AL3G30460.1
Gene Type: Coding gene
Location: scaffold_3 : 13531828-13532256 : negative

Family

Gene family: HOM03D001316
(118 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine): Lysine--tRNA ligase

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	905809
GeneName	g905809
id	PAC:16055647

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006418	IEA	Genome Project	tRNA aminoacylation for protein translation
GO:0006412	IEA	Genome Project	translation
GO:0006430	IEA	InterPro	lysyl-tRNA aminoacylation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005524	IEA	Genome Project	ATP binding
GO:0004812	IEA	Genome Project	aminoacyl-tRNA ligase activity
GO:0000166	IEA	Genome Project	nucleotide binding
GO:0004824	IEA	InterPro	lysine-tRNA ligase activity
GO:0003676	IEA	PLAZA Homology	nucleic acid binding	HOM03D001316

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	IEA	Genome Project	cytoplasm

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR018150	Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR018149	Lysyl-tRNA synthetase, class II, C-terminal
IPR004364	Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR002313	Lysine-tRNA ligase, class II

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.