PLAZA 3.0 Dicots gene overview : AL3G29390

Gene: AL3G29390 (Arabidopsis lyrata)

Overview

Gene Identifier: AL3G29390
Transcript Identifier: AL3G29390.1
Gene Type: Coding gene
Location: scaffold_3 : 12923541-12924131 : positive

Family

Gene family: HOM03D000798
(176 genes in 30 species)
specific family
Subfamily: ORTHO03D021243
(6 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine): Vacuolar iron transporter homolog

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	480044
GeneName	g480044
id	PAC:16038035

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010039	ISO	PLAZA Integrative Orthology	response to iron ion	AT1G76800
GO:0071732	ISO	PLAZA Integrative Orthology	cellular response to nitric oxide	AT1G76800
GO:0071281	ISO	PLAZA Integrative Orthology	cellular response to iron ion	AT1G76800
GO:0071369	ISO	PLAZA Integrative Orthology	cellular response to ethylene stimulus	AT1G76800
GO:0055072	IEA	PLAZA Homology	iron ion homeostasis	HOM03D000798

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005774	IEA	PLAZA Homology	vacuolar membrane	HOM03D000798

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008217	Domain of unknown function DUF125, transmembrane

Mapman id	Description
33.99	development.unspecified

No SignalP domains detected for this gene.