Gene: AL3G28190 (Arabidopsis lyrata)

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Gene Identifier
AL3G28190
Transcript Identifier
AL3G28190.1
Gene Type
Coding gene
Location
scaffold_3 : 12046014-12048843 : positive

Family

Gene family
HOM03D001382
(114 genes in 29 species)
specific family
Subfamily
ORTHO03D005596
(33 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
containing transcription factor ABI3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid342636
GeneNameg342636
idPAC:16054761

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidOS01G68370 AT3G24650
GO:0009790ISOPLAZA Integrative Orthologyembryo developmentOS01G68370 AT3G24650
GO:0031930ISOPLAZA Integrative Orthologymitochondria-nucleus signaling pathwayAT3G24650
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G24650
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT3G24650
GO:0009657ISOPLAZA Integrative Orthologyplastid organizationAT3G24650
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D001382
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D001382
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D001382

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0001076ISOPLAZA Integrative OrthologyRNA polymerase II transcription factor binding transcription factor activityAT3G24650
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT3G24650
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G24650

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G24650
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G24650

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain

Mapman id Description
17.1.2hormone metabolism.abscisic acid.signal transduction
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBABI3VP1
PlantTFDBB3