Gene: AL3G19850 (Arabidopsis lyrata)

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Gene Identifier
AL3G19850
Transcript Identifier
AL3G19850.1
Gene Type
Coding gene
Location
scaffold_3 : 7867935-7870484 : negative

Family

Gene family
HOM03D000154
(665 genes in 5 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Putative F-box protein At3g18330
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid479334
GeneNameg479334
idPAC:16066020

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010311ISOPLAZA Tree-based Orthologylateral root formationAT3G22650
GO:0009733ISOPLAZA Tree-based Orthologyresponse to auxinAT3G22650
GO:0006511ISOPLAZA Tree-based Orthologyubiquitin-dependent protein catabolic processAT1G51320 AT1G51290 AT4G04690 AT3G21410 AT2G04920
GO:0009620ISOPLAZA Tree-based Orthologyresponse to fungusAT2G17310
GO:0009617ISOPLAZA Tree-based Orthologyresponse to bacteriumAT2G17310
GO:0009561ISOPLAZA Tree-based OrthologymegagametogenesisAT1G59680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0090406ISOPLAZA Tree-based Orthologypollen tubeAT3G22650
GO:0005773ISOPLAZA Tree-based OrthologyvacuoleAT3G16580
GO:0009507ISOPLAZA Tree-based OrthologychloroplastAT1G51320
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT5G36200
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT1G25150 AT1G25211 AT1G24800 AT1G25055 AT1G24881

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001810F-box domain
IPR017451F-box associated interaction domain
IPR011043Galactose oxidase/kelch, beta-propeller
IPR006527F-box associated domain, type 1

Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.