Gene: AL3G08780 (Arabidopsis lyrata)

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Gene Identifier
AL3G08780
Transcript Identifier
AL3G08780.1
Gene Type
Coding gene
Location
scaffold_3 : 3441845-3442794 : positive

Family

Gene family
HOM03D000071
(1215 genes in 31 species)
specific family
Subfamily
ORTHO03D014866
(13 genes in 9 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
conjugating enzyme E2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid478172
GeneNameg478172
idPAC:16065108

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT3G08690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAGenome Projectacid-amino acid ligase activity
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G08690
GO:0016874IEAPLAZA Homologyligase activityHOM03D000071
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000071
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000071

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme, E2

Mapman id Description
29.5.11.3protein.degradation.ubiquitin.E2
No SignalP domains detected for this gene.