Gene: AL2G13090 (Arabidopsis lyrata)

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Gene Identifier
AL2G13090
Transcript Identifier
AL2G13090.1
Gene Type
Coding gene
Location
scaffold_2 : 10781642-10782937 : positive

Family

Gene family
HOM03D000389
(321 genes in 29 species)
specific family
Subfamily
ORTHO03D011792
(22 genes in 18 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
U-box domain-containing protein 20
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid925763
GeneNameg925763
idPAC:16041217

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IEAGenome Projectprotein ubiquitination
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT1G66160 AT5G37490
GO:0010193ISOPLAZA Tree-based Orthologyresponse to ozoneAT3G02840
GO:0032491ISOPLAZA Tree-based Orthologydetection of molecule of fungal originSL01G005160
GO:0032446IEAPLAZA Homologyprotein modification by small protein conjugationHOM03D000389
GO:0070647IEAPLAZA Homologyprotein modification by small protein conjugation or removalHOM03D000389
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000389
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000389

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842IEAGenome Projectubiquitin-protein ligase activity
GO:0005488IEAInterProbinding
GO:0016874IEAPLAZA Homologyligase activityHOM03D000389
GO:0019787IEAPLAZA Homologysmall conjugating protein ligase activityHOM03D000389
GO:0016881IEAPLAZA Homologyacid-amino acid ligase activityHOM03D000389
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000389

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151IEAGenome Projectubiquitin ligase complex
GO:0005737ISOPLAZA Tree-based OrthologycytoplasmAT3G02840
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT3G02840
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000389
GO:1902494IEAPLAZA Homologycatalytic complexHOM03D000389
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000389

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011989Armadillo-like helical
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR016024Armadillo-type fold
IPR003613U box domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.