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WorkbenchGene: AL1G44970 (Arabidopsis lyrata)
Overview 
- Gene Identifier
- AL1G44970
- Transcript Identifier
- AL1G44970.1
- Gene Type
- Coding gene
- Location
- scaffold_1 : 26364278-26365534 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
conjugating enzyme E2
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | 923494 |
| GeneName | g923494 |
| id | PAC:16040932 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0008283 | ISO | PLAZA Integrative Orthology | cell proliferation | AT1G50490 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0016881 | IEA | Genome Project | acid-amino acid ligase activity | |
| GO:0016874 | IEA | PLAZA Homology | ligase activity | HOM03D000071 |
| GO:0016879 | IEA | PLAZA Homology | ligase activity, forming carbon-nitrogen bonds | HOM03D000071 |
| GO:0003824 | IEA | PLAZA Homology | catalytic activity | HOM03D000071 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.