PLAZA 3.0 Dicots gene overview : AL1G40750

Gene: AL1G40750 (Arabidopsis lyrata)

Overview

Gene Identifier: AL1G40750
Transcript Identifier: AL1G40750.1
Gene Type: Coding gene
Location: scaffold_1 : 23679487-23680952 : positive

Family

Gene family: HOM03D000081
(1112 genes in 29 species)
specific family
Subfamily: ORTHO03D004103
(36 genes in 25 species)
specific family

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Descriptions

Description (AnnoMine): Probable tuliposide A-converting enzyme b6, amyloplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	473890
GeneName	g473890
id	PAC:16064593

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	Genome Project	metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016787	IEA	Genome Project	hydrolase activity
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03D000081

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002168	Lipase, GDXG, active site
IPR013094	Alpha/beta hydrolase fold-3

Mapman id	Description
35.1	not assigned.no ontology

No SignalP domains detected for this gene.