PLAZA 3.0 Dicots gene overview : AL1G38880

Gene: AL1G38880 (Arabidopsis lyrata)

Overview

Gene Identifier: AL1G38880
Transcript Identifier: AL1G38880.1
Gene Type: Coding gene
Location: scaffold_1 : 22146274-22148486 : positive

Family

Gene family: HOM03D001058
(143 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine): Fructose-1,6-bisphosphatase class 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	922860
GeneName	g922860
id	PAC:16036021

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0005975	IEA	Genome Project	carbohydrate metabolic process
GO:0030388	ISO	PLAZA Integrative Orthology	fructose 1,6-bisphosphate metabolic process	AT1G43670
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT1G43670
GO:0009750	ISO	PLAZA Integrative Orthology	response to fructose	AT1G43670
GO:0015979	ISO	PLAZA Integrative Orthology	photosynthesis	AT1G43670
GO:0005986	ISO	PLAZA Integrative Orthology	sucrose biosynthetic process	AT1G43670
GO:0005983	ISO	PLAZA Integrative Orthology	starch catabolic process	AT1G43670

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0042578	IEA	Genome Project	phosphoric ester hydrolase activity
GO:0042132	IEA	InterPro	fructose 1,6-bisphosphate 1-phosphatase activity
GO:0016791	IEA	PLAZA Homology	phosphatase activity	HOM03D001058
GO:0019203	IEA	PLAZA Homology	carbohydrate phosphatase activity	HOM03D001058
GO:0050308	IEA	PLAZA Homology	sugar-phosphatase activity	HOM03D001058

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G43670
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G43670
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G43670

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR028343	Fructose-1,6-bisphosphatase
IPR020548	Fructose-1,6-bisphosphatase, active site
IPR000146	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.