Gene: AL1G27980 (Arabidopsis lyrata)

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Gene Identifier
AL1G27980
Transcript Identifier
AL1G27980.1
Gene Type
Coding gene
Location
scaffold_1 : 11782912-11783707 : positive

Family

Gene family
HOM03D000053
(1435 genes in 31 species)
specific family
Subfamily
ORTHO03D005366
(34 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Polcalcin Jun o 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid335836
GeneNameg335836
idPAC:16063006

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048767ISOPLAZA Integrative Orthologyroot hair elongationAT1G24620
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT1G24620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005509IEAInterProcalcium ion binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000053
GO:0005488IEAPLAZA HomologybindingHOM03D000053
GO:0043167IEAPLAZA Homologyion bindingHOM03D000053
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000053

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT1G24620
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G24620

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002048EF-hand domain
IPR018247EF-Hand 1, calcium-binding site
IPR011992EF-hand domain pair

Mapman id Description
30.3signalling.calcium
No SignalP domains detected for this gene.