Gene: AL1G15140 (Arabidopsis lyrata)

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Gene Identifier
AL1G15140
Transcript Identifier
AL1G15140.1
Gene Type
Coding gene
Location
scaffold_1 : 6056318-6057153 : negative

Family

Gene family
HOM03D000071
(1215 genes in 31 species)
specific family
Subfamily
ORTHO03D003063
(39 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
enzyme E2 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid471614
GeneNameg471614
idPAC:16059027

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0033523ISOPLAZA Integrative Orthologyhistone H2B ubiquitinationAT1G14400 AT2G02760
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G14400 AT2G02760
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT1G14400
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT1G14400
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G14400 AT2G02760
GO:0009650ISOPLAZA Tree-based OrthologyUV protectionAT2G02760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAGenome Projectacid-amino acid ligase activity
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G14400 AT2G02760
GO:0016874IEAPLAZA Homologyligase activityHOM03D000071
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000071
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000071

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT2G02760

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme, E2

Mapman id Description
29.5.11.3protein.degradation.ubiquitin.E2
No SignalP domains detected for this gene.