Gene: AL1G13900 (Arabidopsis lyrata)

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Gene Identifier
AL1G13900
Transcript Identifier
AL1G13900.1
Gene Type
Coding gene
Location
scaffold_1 : 5532802-5533836 : positive

Family

Gene family
HOM03D000397
(313 genes in 30 species)
specific family
Subfamily
ORTHO03D003508
(37 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
ERF and B3 domain-containing transcription factor RAV1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid920198
GeneNameg920198
idPAC:16062236

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT1G13260
GO:0048527ISOPLAZA Integrative Orthologylateral root developmentAT1G13260
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT1G13260
GO:0009741ISOPLAZA Integrative Orthologyresponse to brassinosteroidAT1G13260
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT1G13260
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000397

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0003677IEAGenome ProjectDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G13260

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003340B3 DNA binding domain
IPR001471AP2/ERF domain
IPR015300DNA-binding pseudobarrel domain
IPR016177DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBAP2-EREBP
PlantTFDBRAV