Gene: AL1G07550 (Arabidopsis lyrata)

Overview top

Gene Identifier
AL1G07550
Transcript Identifier
AL1G07550.1
Gene Type
Coding gene
Location
scaffold_1 : 2939887-2950154 : negative

Family

Gene family
HOM03D000246
(437 genes in 31 species)
specific family
Subfamily
ORTHO03D000125
(162 genes in 31 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Elongation factor 1 alpha
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid311847
GeneNameg311847
idPAC:16050522

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006414IEAInterProtranslational elongation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT1G07930 AT1G07920 AT1G07940 AT5G60390

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924IEAGenome ProjectGTPase activity
GO:0005525IEAGenome ProjectGTP binding
GO:0003746IEAInterProtranslation elongation factor activity
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000246
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000246
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000246
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000246
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000246
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000246
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000246
GO:0032561IEAPLAZA Homologyguanyl ribonucleotide bindingHOM03D000246
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000246
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000246
GO:0008135IEAPLAZA Homologytranslation factor activity, nucleic acid bindingHOM03D000246
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000246
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000246
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000246
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000246
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000246
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000246
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000246
GO:0019001IEAPLAZA Homologyguanyl nucleotide bindingHOM03D000246
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000246
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000246

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT1G07930 AT1G07920 AT1G07940 AT5G60390
GO:0005622IEAPLAZA HomologyintracellularHOM03D000246
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G07920
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT1G07920 AT1G07930 AT1G07940 AT5G60390
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G07920 AT1G07930 AT1G07940 AT5G60390

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004539Translation elongation factor EF1A, eukaryotic/archaeal
IPR004160Translation elongation factor EFTu/EF1A, C-terminal
IPR000795Elongation factor, GTP-binding domain
IPR004161Translation elongation factor EFTu/EF1A, domain 2
IPR009000Translation protein, beta-barrel domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.