Gene: AL1G05400 (Arabidopsis lyrata)

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Gene Identifier
AL1G05400
Transcript Identifier
AL1G05400.1
Gene Type
Coding gene
Location
scaffold_1 : 2116677-2119386 : positive

Family

Gene family
HOM03D000464
(275 genes in 31 species)
specific family
Subfamily
ORTHO03D075636
(2 genes in 2 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Probable E3 ubiquitin-protein ligase ARI12
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pid470600
GeneNameg470600
idPAC:16042063

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071456ISOPLAZA Integrative Orthologycellular response to hypoxiaAT1G05880
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT1G05880

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000464

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR002867Zinc finger, C6HC-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.