PLAZA 3.0 Dicots gene overview : AL1G04640

Gene: AL1G04640 (Arabidopsis lyrata)

Overview

Gene Identifier: AL1G04640
Transcript Identifier: AL1G04640.1
Gene Type: Coding gene
Location: scaffold_1 : 1783564-1785765 : negative

Family

Gene family: HOM03D000064
(1302 genes in 31 species)
specific family
Subfamily: ORTHO03D000421
(89 genes in 28 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): kaurenoic acid oxidase 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	470506
GeneName	g470506
id	PAC:16042481

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	Genome Project	oxidation-reduction process
GO:0009686	ISO	PLAZA Integrative Orthology	gibberellin biosynthetic process	AT1G05160 AT2G32440
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03D000064
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000064
GO:0008152	IEA	PLAZA Homology	metabolic process	HOM03D000064

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005506	IEA	Genome Project	iron ion binding
GO:0009055	IEA	Genome Project	electron carrier activity
GO:0016705	IEA	Genome Project	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	IEA	Genome Project	heme binding
GO:0004497	IEA	InterPro	monooxygenase activity
GO:0051777	ISO	PLAZA Integrative Orthology	ent-kaurenoate oxidase activity	AT1G05160 AT2G32440
GO:0043169	IEA	PLAZA Homology	cation binding	HOM03D000064
GO:0043167	IEA	PLAZA Homology	ion binding	HOM03D000064
GO:0046914	IEA	PLAZA Homology	transition metal ion binding	HOM03D000064
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03D000064
GO:0046906	IEA	PLAZA Homology	tetrapyrrole binding	HOM03D000064
GO:0046872	IEA	PLAZA Homology	metal ion binding	HOM03D000064
GO:1901363	IEA	PLAZA Homology	heterocyclic compound binding	HOM03D000064
GO:0005488	IEA	PLAZA Homology	binding	HOM03D000064
GO:0016491	IEA	PLAZA Homology	oxidoreductase activity	HOM03D000064
GO:0097159	IEA	PLAZA Homology	organic cyclic compound binding	HOM03D000064

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT1G05160 AT2G32440

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001128	Cytochrome P450
IPR002403	Cytochrome P450, E-class, group IV
IPR017972	Cytochrome P450, conserved site

Mapman id	Description
26.10	misc.cytochrome P450

No SignalP domains detected for this gene.