Anchorpoints

Gene id
EG0009G18270
Organism
Eucalyptus grandis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
EG0010G22460No description available.scaffold_10+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G38180No description available.scaffold_3-View
AL2G20980No description available.scaffold_2-View
AL3G15170No description available.scaffold_3-View
AL1G49000No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G53820RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1); Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2391; Fungi - 736; Plants - 4843; Viruses - 80; Other Eukaryotes - 1251 (source: NCBI BLink).1+View
AT3G14320Zinc finger, C3HC4 type (RING finger) family protein Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53820.1); Has 9779 Blast hits to 9754 proteins in 298 species: Archae - 0; Bacteria - 2; Metazoa - 2465; Fungi - 778; Plants - 5098; Viruses - 64; Other Eukaryotes - 1372 (source: NCBI BLink).3-View
AT2G17450Encodes a putative RING-H2 finger protein RHA3a. RING-H2 finger A3A RING-H2 finger A3A (RHA3A); FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A3B (TAIR:AT4G35480.1); Has 9845 Blast hits to 9818 proteins in 280 species: Archae - 0; Bacteria - 0; Metazoa - 2501; Fungi - 735; Plants - 5213; Viruses - 41; Other Eukaryotes - 1355 (source: NCBI BLink).2-View
AT1G72200RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1); Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0; Bacteria - 4; Metazoa - 2295; Fungi - 806; Plants - 4899; Viruses - 51; Other Eukaryotes - 1288 (source: NCBI BLink).1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00129G00380No description available.scaffold00129-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G28660No description available.A05+View
BR07G28390No description available.A07-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G01880No description available.Bvchr7.sca021+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G11940No description available.Chr7-View
CL09G01140No description available.Chr9-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00067G00860No description available.CM3.5_scaffold00067+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00025G02000No description available.supercontig_25-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G13350No description available.scaffold_3-View
CRU_001G41030No description available.scaffold_1+View
CRU_002G17930No description available.scaffold_2-View
CRU_003G30330No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00136G00170No description available.scaffold00136+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G17130RING-H2 finger protein ATL1P (probable)scf0513160-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G05190No description available.Gm07-View
GM16G01700No description available.Gm16-View
GM03G42390No description available.Gm03+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G05460No description available.Chr11+View
GR09G14810No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G075660No description available.chr1-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD09G016470No description available.9+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10504G00240No description available.scaffold10504+View
ME05875G01620No description available.scaffold05875-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G023400zinc finger C C3HC4 type (RING finger) proteinchr8-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G01750No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G07330No description available.Chr03-View
PT04G20960No description available.Chr04+View
PT01G45380No description available.Chr01-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G123680Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech03-View
SL06G063110Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech06-View
SL12G055710RING finger protein 38 (AHRD V1 *-*- RNF38_HUMAN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G023590RING finger 1-like (AHRD V1 *-*- Q69KM4_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12-View
ST03G034290RING finger protein 44 (AHRD V1 *-*- E2BB02_9HYME); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr03+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G13000No description available.scaffold_6-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G27290similar to AT1G72200|zinc finger (C3HC4-type RING finger) family proteinch5-6-View
TP3G12620similar to AT1G53820|zinc finger (C3HC4-type RING finger) family proteinch3-1-View
TP1G40310similar to AT1G53820|zinc finger (C3HC4-type RING finger) family proteinch1-2+View


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Gene id
Species
Description
Chromosome
Strand