Anchorpoints

Gene id
AT1G75370
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G34580Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth. Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink).4+View
AT1G19650Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75370.1); Has 2627 Blast hits to 2615 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 801; Fungi - 541; Plants - 877; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein1-View
AT4G39170Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: phosphatidylinositol transporter activity, transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G21520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein4+View
AT2G18180Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein2-View
AT2G16380Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G34580.1); Has 2691 Blast hits to 2676 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 819; Fungi - 614; Plants - 876; Viruses - 0; Other Eukaryotes - 382 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein2+View
AT5G56160Sec14p-like phosphatidylinositol transfer family protein Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G55690.2); Has 2063 Blast hits to 2057 proteins in 224 species: Archae - 3; Bacteria - 0; Metazoa - 550; Fungi - 432; Plants - 748; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink).5+View
AT4G36490SEC14-like 12 SEC14-like 12 (SFH12); CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G18180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4+View
AT2G21520Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G20660No description available.scaffold_1-View
AL7G01090No description available.scaffold_7+View
AL8G21610No description available.scaffold_8+View
AL7G04360No description available.scaffold_7+View
AL3G40380No description available.scaffold_3+View
AL3G39170No description available.scaffold_3-View
AL4G00750No description available.scaffold_4-View
AL2G24250No description available.scaffold_2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G20020No description available.A08+View
BR03G54280No description available.A03+View
BR03G12290No description available.A03-View
BR07G19980No description available.A07+View
BR06G39430No description available.A06+View
BR06G14110No description available.A06-View
BR01G03580No description available.A01-View
BR09G44480No description available.A09+View
BR08G13870No description available.A08-View
BR04G11970No description available.A04+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G08940No description available.Bvchr1.sca001+View
BV9G13150No description available.Bvchr9.sca026+View
BV6G16080No description available.Bvchr6.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G20030No description available.Chr1+View
CL11G14710No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00059G01340No description available.CM3.5_scaffold00059+View
CM00007G08970No description available.CM3.5_scaffold00007+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G01670No description available.supercontig_6+View
CP00099G00370No description available.supercontig_99+View
CP00106G00090No description available.supercontig_106-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G03590No description available.scaffold_7+View
CRU_003G31080No description available.scaffold_3-View
CRU_002G20970No description available.scaffold_2-View
CRU_007G05390No description available.scaffold_7-View
CRU_007G00970No description available.scaffold_7+View
CRU_001G18390No description available.scaffold_1-View
CRU_008G16060No description available.scaffold_8+View
CRU_003G29010No description available.scaffold_3+View
CRU_004G00570No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G00300No description available.scaffold00017+View
CS00287G00080No description available.scaffold00287+View
CS00002G04590No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G10300No description available.scaffold_9+View
EG0006G12900No description available.scaffold_6-View
EG0007G12040No description available.scaffold_7-View
EG0009G20260No description available.scaffold_9-View
EG0006G15250No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G50480Sec14 cytosolic factor (PI/PC TP) (probable)LG2+View
FV2G00690Sec14 cytosolic factor (PI/PC TP) (probable)LG2+View
FV1G14700Sec14 cytosolic factor (PI/PC TP) (probable)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G07661No description available.Gm11+View
GM04G03230No description available.Gm04+View
GM11G12260No description available.Gm11+View
GM17G37150No description available.Gm17-View
GM04G01220No description available.Gm04+View
GM06G03300No description available.Gm06+View
GM02G05980No description available.Gm02-View
GM01G37640No description available.Gm01-View
GM12G04453No description available.Gm12+View
GM14G07850No description available.Gm14+View
GM16G24670No description available.Gm16-View
GM06G01260No description available.Gm06+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR13G03530No description available.Chr13+View
GR03G01300No description available.Chr03-View
GR05G10920No description available.Chr05-View
GR08G03030No description available.Chr08+View
GR12G15510No description available.Chr12-View
GR07G20070No description available.Chr07-View
GR05G24550No description available.Chr05+View
GR09G19980No description available.Chr09+View
GR11G10070No description available.Chr11-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G043470No description available.chr1+View
LJ3G047330No description available.chr3+View
LJ5G002050No description available.chr5-View
LJ2G030170No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G018760No description available.11+View
MD08G001670No description available.8+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G00460No description available.scaffold06512+View
ME08122G00100No description available.scaffold08122+View
ME07520G02040No description available.scaffold07520+View
ME07012G00860No description available.scaffold07012-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G117090Sec14p-like phosphatidylinositol transfer family proteinchr3+View
MT3G112150Sec14p-like phosphatidylinositol transfer family proteinchr3-View
MT4G070720Sec14p-like phosphatidylinositol transfer family proteinchr4+View
MT8G076880Sec14p-like phosphatidylinositol transfer family proteinchr8-View
MT6G015645Sec14p-like phosphatidylinositol transfer family proteinchr6+View
MT1G022480Sec14p-like phosphatidylinositol transfer family proteinchr1-View
MT5G021050Sec14p-like phosphatidylinositol transfer family proteinchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G50616phosphatidylinositol transfer, putative, expressed1-View
OS02G04020No description available.2+View
OS05G46720phosphatidylinositol transfer, putative, expressed5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G18090No description available.scaffold_7+View
PPE_001G38330No description available.scaffold_1+View
PPE_008G11000No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G11940No description available.Chr09+View
PT05G23050No description available.Chr05-View
PT05G11970No description available.Chr05-View
PT04G15760No description available.Chr04+View
PT02G03260No description available.Chr02+View
PT07G02030No description available.Chr07-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30131G02240No description available.30131+View
RC29634G00270No description available.29634-View
RC30170G04360No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G080690SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch04-View
SL01G109860Phosphatidylinositol/phosphatidylcholine transfer protein-like (AHRD V1 **-* Q9LRX7_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch01+View
SL10G053900SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G047280SEC14 cytosolic factor family protein (AHRD V1 *--- D7KN07_ARALY); contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function, C-terminalchr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G02680No description available.scaffold_1-View
TC0002G07700No description available.scaffold_2+View
TC0008G03070No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34120similar to AT4G36490|SFH12 (SEC14-LIKE 12)ch7-6-View
TP3G31610similar to AT2G18180|SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativech3-6-View
TP1G17490similar to AT1G19650|SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativech1-1-View
TP7G32370similar to AT4G34580|COW1 (CAN OF WORMS1)ch7-5+View
TP7G36640similar to AT4G39180|SEC14ch7-6+View
TP5G30510similar to AT1G75370|SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putativech5-7-View
TP6G18010similar to AT5G56160|transporterch6-6+View
TP3G29610similar to AT2G16380|SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinch3-5+View
TP4G00680similar to AT2G21520|transporterch4-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G02840name=GSVIVG01023815001;chr3+View
VV04G01590name=GSVIVG01018887001;chr4+View
VV18G09350name=GSVIVG01009759001;chr18-View


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Gene id
Species
Description
Chromosome
Strand