Anchorpoints

Gene id
AL7G11180
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G18650maternal effect embryo arrest 16 (MEE16); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G30400.1); Has 9180 Blast hits to 9159 proteins in 289 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 782; Plants - 4907; Viruses - 48; Other Eukaryotes - 1290 (source: NCBI BLink). RING/U-box superfamily protein2-View
AT5G57750RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1); Has 9542 Blast hits to 9521 proteins in 299 species: Archae - 0; Bacteria - 6; Metazoa - 2301; Fungi - 713; Plants - 5095; Viruses - 94; Other Eukaryotes - 1333 (source: NCBI BLink). RING/U-box superfamily protein5+View
AT4G30370RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18670.1); Has 7837 Blast hits to 7816 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 2070; Fungi - 511; Plants - 4382; Viruses - 17; Other Eukaryotes - 857 (source: NCBI BLink).4-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00019G01340No description available.scaffold00019+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G15960No description available.A08+View
BR01G07070No description available.A01-View
BR07G01800No description available.A07-View
BR09G09890No description available.A09-View
BR03G51550No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G13470No description available.Chr6+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00003G02060No description available.CM3.5_scaffold00003-View
CM00012G01800No description available.CM3.5_scaffold00012-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00075G00170No description available.supercontig_75+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G17790No description available.scaffold_8+View
CRU_003G31680No description available.scaffold_3-View
CRU_007G09660No description available.scaffold_7-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00048G00650No description available.scaffold00048-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G10200No description available.scaffold_3+View
EG0003G01680No description available.scaffold_3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G01461No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G27290No description available.Chr04-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G033910No description available.chr4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G54830RING-H2 finger protein, putative, expressed2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G09800No description available.Chr18-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G005490RING finger-like (AHRD V1 *-*- Q5Z6V1_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G15560No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G19430similar to AT5G57750|zinc finger (C3HC4-type RING finger) family proteinch6-6+View
TP7G28240similar to AT4G30370|zinc finger (C3HC4-type RING finger) family proteinch7-5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G08220name=GSVIVG01023776001;chr11-View


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Gene id
Species
Description
Chromosome
Strand