Anchorpoints

Gene id
AL4G20870
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G35500shikimate kinase like 2 (SKL2); FUNCTIONS IN: shikimate kinase activity, ATP binding; INVOLVED IN: aromatic amino acid family biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052), Shikimate kinase (InterPro:IPR000623), HSP20-like chaperone (InterPro:IPR008978), CS domain (InterPro:IPR017447); Has 380 Blast hits to 380 proteins in 88 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro. shikimate kinase like 22+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G21000No description available.A04+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G00810No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00021G01320No description available.CM3.5_scaffold00021-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G16600No description available.scaffold_4+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00212G00090No description available.scaffold00212-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G02090No description available.scaffold_5-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G22430No description available.Chr08-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G03200No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G09660No description available.Chr03+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30068G01350No description available.30068+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G076410Shikimate kinase-like protein (AHRD V1 **-- B9GZJ5_POPTR)%3B contains Interpro domain(s) IPR017447 CSch08+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST08G021890Shikimate kinase-like protein (AHRD V1 ***- B9GZJ5_POPTR); contains Interpro domain(s) IPR017447 CSchr08-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G30450No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G17720similar to AT2G35500|shikimate kinase-relatedch4-6+View


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Gene id
Species
Description
Chromosome
Strand