Anchorpoints

Gene id
AL3G36010
Organism
Arabidopsis lyrata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AL7G12880No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G20030RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28890.1); Has 9596 Blast hits to 9571 proteins in 288 species: Archae - 0; Bacteria - 6; Metazoa - 2467; Fungi - 781; Plants - 5028; Viruses - 54; Other Eukaryotes - 1260 (source: NCBI BLink). RING/U-box superfamily protein2+View
AT4G28890RING/U-box superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: root stele, root endodermis, hypocotyl, root, primary root differentiation zone; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G20030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G08280No description available.A01+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G05100No description available.Bvchr8.sca018-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G09170No description available.Chr6-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00040G00310No description available.supercontig_40-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G33000No description available.scaffold_3+View
CRU_007G11080No description available.scaffold_7+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00027G00260No description available.scaffold00027-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G29340No description available.scaffold_3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G35220RING-H2 finger protein ATL4J, Precursor (probable)scf0513146-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G07480No description available.Chr10-View
GR01G00770No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G005330No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09501G00610No description available.scaffold09501+View
ME00847G00690No description available.scaffold00847+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G24350No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G04240No description available.Chr18-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G007320Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G009440E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G09960No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G26870similar to AT4G28890|protein binding / ubiquitin-protein ligase/ zinc ion bindingch7-5-View
TP3G33350similar to AT2G20030|zinc finger (C3HC4-type RING finger) family proteinch3-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G04720name=GSVIVG01015336001;chr11+View


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Gene id
Species
Description
Chromosome
Strand