Functional Clusters   top

Cluster information

Cluster identifier
CH_ath_62
Species
Arabidopsis thaliana
Chromosome
1
E-value
0.00000135819
Data type
GO
Data identifier
GO:0006164
Data description
purine nucleotide biosynthetic process

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM03D000035173146629
HOM03D002829642131
HOM03D006273351130
HOM03D00029438912131
HOM03D002507723128
HOM03D0007941775131

Gene information

In cluster Gene id Description Gene type Gene family
V AT1G16110Putative wall-associated receptor kinase-like 13Coding geneHOM03D000035 ORTHO03D000058
V AT1G16120Putative wall-associated receptor kinase-like 13Coding geneHOM03D000035 ORTHO03D000058
V AT1G16130wall associated kinase-like 2Coding geneHOM03D000035 ORTHO03D000058
X AT1G16140No description available.Pseudo gene
V AT1G16150Putative wall-associated receptor kinase-like 13Coding geneHOM03D000035 ORTHO03D000058
V AT1G16160wall associated kinase-like 5 (WAKL5); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Wall-associated kinase (InterPro:IPR013695), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: wall associated kinase-like 1 (TAIR:AT1G16120.1); Has 123134 Blast hits to 120241 proteins in 4306 species: Archae - 131; Bacteria - 13824; Metazoa - 45906; Fungi - 10588; Plants - 34048; Viruses - 501; Other Eukaryotes - 18136 (source: NCBI BLink).Coding geneHOM03D000035 ORTHO03D000058
X AT1G16170unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79660.1); Has 55 Blast hits to 55 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D003448 ORTHO03D073193
X AT1G16180Serinc-domain containing serine and sphingolipid biosynthesis protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT3G06170.1); Has 780 Blast hits to 770 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 445; Fungi - 127; Plants - 141; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).Coding geneHOM03D000934 orphan gene
X AT1G16190RADIATION SENSITIVE23A (RAD23A); FUNCTIONS IN: damaged DNA binding, ubiquitin binding, proteasome binding; INVOLVED IN: proteasomal ubiquitin-dependent protein catabolic process, base-excision repair, nucleotide-excision repair; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock chaperonin-binding (InterPro:IPR006636), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), XPC-binding domain (InterPro:IPR015360), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT1G79650.2); Has 9140 Blast hits to 4719 proteins in 640 species: Archae - 2; Bacteria - 43; Metazoa - 4062; Fungi - 1252; Plants - 2281; Viruses - 138; Other Eukaryotes - 1362 (source: NCBI BLink).Coding geneHOM03D001128 ORTHO03D002714
X AT1G16210unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink).Coding geneHOM03D006006 ORTHO03D005887
X AT1G16220Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink).Coding geneHOM03D000267 ORTHO03D001713
X AT1G16225Syntaxin-51Coding geneHOM03D002369 orphan gene
X AT1G16230Target SNARE coiled-coil domain protein; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: syntaxin of plants 51 (TAIR:AT1G16240.2); Has 184 Blast hits to 184 proteins in 71 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 66; Plants - 93; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).Coding geneHOM03D002369 orphan gene
X AT1G16240syntaxin of plants 51 (SYP51); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport; LOCATED IN: endosome membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), Syntaxin/epimorphin, conserved site (InterPro:IPR006012); BEST Arabidopsis thaliana protein match is: syntaxin of plants 52 (TAIR:AT1G79590.2); Has 837 Blast hits to 837 proteins in 196 species: Archae - 0; Bacteria - 4; Metazoa - 265; Fungi - 234; Plants - 241; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).Coding geneHOM03D002369 ORTHO03D027486
X AT1G16250kelch-repeat protein At1g16250Coding geneHOM03D000585 ORTHO03D015577
V AT1G16260Putative wall-associated receptor kinase-like 13Coding geneHOM03D000035 ORTHO03D000058
X AT1G16270Probable LIM domain-containing serine/threonine-protein kinase DDBCoding geneHOM03D000028 ORTHO03D000789
X AT1G16280RNA helicase 36Coding geneHOM03D000033 ORTHO03D005508
X AT1G16290FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Lytic transglycosylase-like, catalytic (InterPro:IPR008258); Has 171 Blast hits to 155 proteins in 40 species: Archae - 0; Bacteria - 54; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).Coding geneHOM03D005725 ORTHO03D007600
X AT1G16300Glyceraldehyde 3-phosphate dehydrogenaseCoding geneHOM03D000433 ORTHO03D002409
X AT1G16310Metal tolerance protein 10Coding geneHOM03D000760 ORTHO03D001253
X AT1G16320Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G79510.2); Has 274 Blast hits to 274 proteins in 79 species: Archae - 0; Bacteria - 78; Metazoa - 80; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).Coding geneHOM03D002105 ORTHO03D020129
X AT1G16330cyclin b3;1 (CYCB3;1); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin B2;3 (TAIR:AT1G20610.1); Has 4427 Blast hits to 4424 proteins in 376 species: Archae - 0; Bacteria - 0; Metazoa - 2128; Fungi - 557; Plants - 1053; Viruses - 34; Other Eukaryotes - 655 (source: NCBI BLink).Coding geneHOM03D000175 ORTHO03D010704
X AT1G16340dehydro-3-deoxyphosphooctonate aldolaseCoding geneHOM03D005917 ORTHO03D006690
V AT1G16350Inosine-5'-monophosphate dehydrogenaseCoding geneHOM03D002829 ORTHO03D001508
X AT1G16360Putative ALA-interacting subunit 4Coding geneHOM03D001173 ORTHO03D001130
X AT1G16370organic cation/carnitine transporter 6Coding geneHOM03D000737 ORTHO03D018153
X AT1G16380Cation/H(+) antiporter 2Coding geneHOM03D000123 ORTHO03D002653
X AT1G16390organic cation/carnitine transporter 3Coding geneHOM03D000737 ORTHO03D001878
X AT1G16400Dihomomethionine N-hydroxylaseCoding geneHOM03D000004 ORTHO03D053055
X AT1G16410cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 27252 Blast hits to 27093 proteins in 1494 species: Archae - 44; Bacteria - 2170; Metazoa - 10673; Fungi - 5027; Plants - 8510; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).Coding geneHOM03D000004 ORTHO03D053056
X AT1G16420Metacaspase-8Coding geneHOM03D001276 ORTHO03D034273
X AT1G16430Surfeit locus protein 5 subunit 22 of Mediator complexCoding geneHOM03D004263 ORTHO03D003588
X AT1G16440RAC family serine/threonine-protein kinase homologCoding geneHOM03D000076 ORTHO03D000020
X AT1G16445Putative rRNA methylase YtqBCoding geneHOM03D006654 ORTHO03D009045
X AT1G16450pre-tRNARNA gene
X AT1G16460rhodanese homologue 2 (RDH2); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: mercaptopyruvate sulfurtransferase 1 (TAIR:AT1G79230.1); Has 6167 Blast hits to 6142 proteins in 1437 species: Archae - 162; Bacteria - 3582; Metazoa - 248; Fungi - 148; Plants - 95; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).Coding geneHOM03D003075 ORTHO03D001880
X AT1G16470Proteasome subunit alpha type-2Coding geneHOM03D000253 ORTHO03D001991
X AT1G16480Pentatricopeptide repeat-containing proteinCoding geneHOM03D000001 orphan gene
X AT1G16489other RNARNA gene
X AT1G16490Trichome differentiation protein GL1Coding geneHOM03D000008 ORTHO03D022666
X AT1G16500unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D002989 ORTHO03D027876
X AT1G16510Auxin-induced proteinCoding geneHOM03D000031 ORTHO03D027659
X AT1G16515unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneorphan geneorphan gene
X AT1G16520unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).Coding geneHOM03D001578 ORTHO03D002192
X AT1G16530LOB domain-containing proteinCoding geneHOM03D000083 ORTHO03D045584
X AT1G16540Molybdenum cofactor sulfuraseCoding geneHOM03D003907 ORTHO03D004880
X AT1G16550pseudogene, putative cell division cycle protein, blastp match of 53% identity and 2.4e-136 P-value to GP|6069665|dbj|BAA85441.1||AP000616 EST D15969(C1695) corresponds to a region of the predicted gene.~similar to valosin-containing protein (U20213) {Oryza sativa (japonica cultivar-group)}Pseudo gene
X AT1G16560Post-GPI attachment to proteins factor 3Coding geneHOM03D001990 ORTHO03D001407
X AT1G16570Chitobiosyldiphosphodolichol beta-mannosyltransferaseCoding geneHOM03D004166 ORTHO03D004075
X AT1G16590DNA-binding HORMA family proteinCoding geneHOM03D006415 ORTHO03D008674
X AT1G16600pseudogene, putative cycloartenol synthasePseudo gene
X AT1G16610arginine/serine-rich 45 (SR45); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: arginine/serine-rich protein-related (TAIR:AT1G79100.1).Coding geneHOM03D004597 ORTHO03D011090
X AT1G16620hAT-like transposase family (hobo/Ac/Tam3), has a 5.7e-158 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)Transposon
X AT1G16630unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G16270.1); Has 10587 Blast hits to 5736 proteins in 617 species: Archae - 88; Bacteria - 963; Metazoa - 3686; Fungi - 820; Plants - 541; Viruses - 438; Other Eukaryotes - 4051 (source: NCBI BLink).Coding geneHOM03D005627 ORTHO03D006625
X AT1G16635No description available.RNA gene
X AT1G16640B3 domain-containing protein At1g16640Coding geneHOM03D004305 ORTHO03D027241
X AT1G16650Protein RRNAD1Coding geneHOM03D006570 ORTHO03D007949
X AT1G16660copia-like retrotransposon family, has a 2.0e-268 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)Transposon
X AT1G16670Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09010.1); Has 119178 Blast hits to 117668 proteins in 4361 species: Archae - 113; Bacteria - 13232; Metazoa - 43958; Fungi - 10262; Plants - 33662; Viruses - 406; Other Eukaryotes - 17545 (source: NCBI BLink).Coding geneHOM03D000058 ORTHO03D001323
X AT1G16680Chaperone DnaJ-domain superfamily proteinCoding geneHOM03D002075 ORTHO03D004215
X AT1G16690of polycomb homolog 2Coding geneHOM03D003243 ORTHO03D001580
X AT1G16700oxidoreductase 23 kDa subunit, mitochondrialCoding geneHOM03D003780 ORTHO03D001980
X AT1G16705Histone acetyltransferaseCoding geneHOM03D000612 ORTHO03D047767
X AT1G16710histone acetyltransferase of the CBP family 12Coding geneHOM03D000612 ORTHO03D000593
X AT1G16720Divinyl chlorophyllide a 8-vinyl-reductase, chloroplasticCoding geneHOM03D000612 ORTHO03D006728
X AT1G16730unknown protein 6 (UP6); Has 17 Blast hits to 17 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).Coding geneHOM03D008039 ORTHO03D013525
X AT1G16740protein L20Coding geneHOM03D004646 ORTHO03D004647
X AT1G16750Protein of unknown function, DUF547Coding geneHOM03D000317 ORTHO03D005092
X AT1G16760Receptor like protein kinaseCoding geneHOM03D000166 ORTHO03D000063
X AT1G16770unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).Coding geneHOM03D003667 ORTHO03D004663
X AT1G16780VHP2;2; FUNCTIONS IN: inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity; INVOLVED IN: proton transport; LOCATED IN: Golgi apparatus, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inorganic H+ pyrophosphatase (InterPro:IPR004131); BEST Arabidopsis thaliana protein match is: vacuolar H+-pyrophosphatase 2 (TAIR:AT1G78920.2); Has 6490 Blast hits to 6472 proteins in 788 species: Archae - 67; Bacteria - 1308; Metazoa - 5; Fungi - 1; Plants - 281; Viruses - 0; Other Eukaryotes - 4828 (source: NCBI BLink).Coding geneHOM03D000682 orphan gene
X AT1G16790ribosomal protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; Has 10 Blast hits to 10 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D007659 ORTHO03D011282
X AT1G16800NFX1-type zinc finger-containing protein 1Coding geneHOM03D000186 ORTHO03D007679
X AT1G16810Protein FAM32ACoding geneHOM03D002309 ORTHO03D007053
X AT1G16820proton ATPase catalytic subunit ACoding geneHOM03D003276 ORTHO03D078674
X AT1G16825Reticulon family proteinCoding geneHOM03D005423 ORTHO03D070652
X AT1G16830Putative pentatricopeptide repeat-containing protein At1g16830Coding geneHOM03D000002 ORTHO03D012816
X AT1G16840unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03D002510 ORTHO03D026305
X AT1G16850unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D010560 ORTHO03D016761
X AT1G16858conserved peptide upstream open reading frame 55Coding geneorphan geneorphan gene
X AT1G16860Ubiquitin-specific protease family C19-related proteinCoding geneHOM03D000969 ORTHO03D000800
V AT1G16870mitochondrial 28S ribosomal protein S29-relatedCoding geneHOM03D006273 ORTHO03D007594
X AT1G16880DS12 from 2D-PAGE of leaf, chloroplasticCoding geneHOM03D002058 ORTHO03D003842
X AT1G16890Putative ubiquitin-conjugating enzyme E2 N-likeCoding geneHOM03D000071 orphan gene
X AT1G16900Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferaseCoding geneHOM03D006352 ORTHO03D009205
X AT1G16905Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480); BEST Arabidopsis thaliana protein match is: D-mannose binding lectin protein with Apple-like carbohydrate-binding domain (TAIR:AT1G78860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03D001178 ORTHO03D047434
X AT1G16910LIGHT SENSITIVE HYPOCOTYLS 8 (LSH8); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G78815.1); Has 310 Blast hits to 310 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 296; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D000330 orphan gene
X AT1G16916unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03D007634 ORTHO03D011509
X AT1G16920Ras-related protein RabCoding geneHOM03D000037 ORTHO03D012485
X AT1G16930F-box/RNI-like/FBD-like domains-containing proteinCoding geneHOM03D000077 ORTHO03D015929
X AT1G16940Putative F-box/FBD/LRR-repeat protein At1g16940Coding geneHOM03D000077 ORTHO03D047989
X AT1G16950unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D010024 ORTHO03D027138
X AT1G16960Ubiquitin domain-containing protein 2Coding geneHOM03D002860 ORTHO03D027027
X AT1G16970helicase 2 subunit KU70Coding geneHOM03D005304 ORTHO03D008440
X AT1G16980trehalose-phosphatase/synthase 2Coding geneHOM03D000342 ORTHO03D000704
X AT1G17000Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4Coding geneHOM03D000342 ORTHO03D000704
X AT1G17010Thebaine 6-O-demethylaseCoding geneHOM03D000012 ORTHO03D014404
X AT1G17020Thebaine 6-O-demethylaseCoding geneHOM03D000012 ORTHO03D014404
X AT1G17030unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47010.2); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).Coding geneHOM03D001637 ORTHO03D000879
X AT1G17040SH2 domain protein A (SHA); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: SH2 motif (InterPro:IPR000980), STAT transcription factor, core (InterPro:IPR001217), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: SH2 domain protein B (TAIR:AT1G78540.1).Coding geneHOM03D002184 ORTHO03D003810
X AT1G17050Solanesyl diphosphate synthase 2, chloroplasticCoding geneHOM03D001572 ORTHO03D002080
X AT1G1706011-oxo-beta-amyrin 30-oxidaseCoding geneHOM03D000070 ORTHO03D000031
X AT1G17070Tuftelin-interacting protein 11Coding geneHOM03D002979 ORTHO03D002818
X AT1G17080Ribosomal protein L18ae familyCoding geneHOM03D002081 ORTHO03D006826
X AT1G17090unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D010962 ORTHO03D022054
X AT1G17100Heme-binding protein 2Coding geneHOM03D001440 ORTHO03D007312
X AT1G17110ubiquitin-specific protease 15 (UBP15); CONTAINS InterPro DOMAIN/s: Zinc finger, MYND-type (InterPro:IPR002893), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 18 (TAIR:AT4G31670.1).Coding geneHOM03D000225 ORTHO03D008443
X AT1G17120cationic amino acid transporter 8 (CAT8); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: intracellular membrane-bounded organelle, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31846 Blast hits to 31753 proteins in 2313 species: Archae - 496; Bacteria - 26086; Metazoa - 1876; Fungi - 1926; Plants - 406; Viruses - 0; Other Eukaryotes - 1056 (source: NCBI BLink).Coding geneHOM03D000323 ORTHO03D000191
X AT1G17130Family of unknown function (DUF572) ; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF572 (InterPro:IPR007590); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF572) (TAIR:AT2G32050.1); Has 1391 Blast hits to 1324 proteins in 252 species: Archae - 3; Bacteria - 52; Metazoa - 454; Fungi - 341; Plants - 148; Viruses - 5; Other Eukaryotes - 388 (source: NCBI BLink).Coding geneHOM03D002428 ORTHO03D004051
X AT1G17140interactor of constitutive active rops 1 (ICR1); BEST Arabidopsis thaliana protein match is: ROP interactive partner 2 (TAIR:AT1G78430.1); Has 53861 Blast hits to 29615 proteins in 2229 species: Archae - 901; Bacteria - 7093; Metazoa - 25838; Fungi - 5211; Plants - 3173; Viruses - 136; Other Eukaryotes - 11509 (source: NCBI BLink).Coding geneHOM03D003480 ORTHO03D003538
X AT1G17145RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G78420.2); Has 249 Blast hits to 247 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 148; Plants - 77; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).Coding geneHOM03D003003 ORTHO03D047789
X AT1G17147VQ motif-containing proteinCoding geneHOM03D003697 ORTHO03D027406
X AT1G17150Pectin lyase-like superfamily proteinCoding geneHOM03D000052 ORTHO03D011965
X AT1G17160Uncharacterized sugar kinase MTH_1544Coding geneHOM03D002184 ORTHO03D003560
X AT1G17170Probable glutathione S-transferase MSR-1Coding geneHOM03D000068 ORTHO03D034046
X AT1G17180glutathione S-transferase TAU 25 (GSTU25); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 24 (TAIR:AT1G17170.1); Has 6324 Blast hits to 6297 proteins in 1135 species: Archae - 0; Bacteria - 2853; Metazoa - 581; Fungi - 157; Plants - 1982; Viruses - 0; Other Eukaryotes - 751 (source: NCBI BLink).Coding geneHOM03D000068 ORTHO03D046396
X AT1G17190glutathione S-transferase tau 26 (GSTU26); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 25 (TAIR:AT1G17180.1); Has 5496 Blast hits to 5481 proteins in 1084 species: Archae - 0; Bacteria - 2439; Metazoa - 409; Fungi - 139; Plants - 1934; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink).Coding geneHOM03D000068 ORTHO03D027800
X AT1G17200Uncharacterised protein family (UPF0497); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT3G14380.1); Has 681 Blast hits to 681 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 681; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D002475 ORTHO03D005328
X AT1G17210Nuclear-interacting partner of ALKCoding geneHOM03D002176 ORTHO03D003191
X AT1G17220fu-gaeri1 (FUG1); FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal (InterPro:IPR006847), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Initiation factor 2 (InterPro:IPR000178), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein (TAIR:AT4G11160.1); Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215; Bacteria - 42273; Metazoa - 2198; Fungi - 2344; Plants - 1110; Viruses - 4; Other Eukaryotes - 15328 (source: NCBI BLink).Coding geneHOM03D001870 orphan gene
X AT1G17230Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03D000006 orphan gene
X AT1G17232No description available.RNA gene
X AT1G17235ROTUNDIFOLIA like 11 (RTFL11); Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D019157 ORTHO03D075637
X AT1G17240receptor like protein 2Coding geneHOM03D000006 ORTHO03D003161
X AT1G17255other RNARNA gene
X AT1G17250Tyrosine-sulfated glycopeptide receptor 1Coding geneHOM03D000006 ORTHO03D003161
V AT1G17260Putative ATPase, plasma membrane-likeCoding geneHOM03D000294 ORTHO03D000024
X AT1G17270O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G50420.1); Has 98 Blast hits to 96 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).Coding geneHOM03D003380 ORTHO03D001539
X AT1G17275Mutator-like transposase family, has a 5.8e-31 P-value blast match to GB:AAA21566 mudrA of transposon='MuDR' (MuDr-element) (Zea mays)Transposon
X AT1G17277transposable element geneTransposon
X AT1G17280ubiquitin-conjugating enzyme 34 (UBC34); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 33 (TAIR:AT5G50430.2); Has 7599 Blast hits to 7596 proteins in 375 species: Archae - 0; Bacteria - 0; Metazoa - 3285; Fungi - 1587; Plants - 1489; Viruses - 20; Other Eukaryotes - 1218 (source: NCBI BLink).Coding geneHOM03D001644 ORTHO03D004831
X AT1G17285unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).Coding geneHOM03D008301 ORTHO03D023043
X AT1G17290alanine aminotransferas (AlaAT1); FUNCTIONS IN: L-alanine:2-oxoglutarate aminotransferase activity, ATP binding; INVOLVED IN: response to cadmium ion, response to hypoxia, L-alanine catabolic process, by transamination; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: alanine aminotransferase 2 (TAIR:AT1G72330.1); Has 28241 Blast hits to 28232 proteins in 2888 species: Archae - 752; Bacteria - 19527; Metazoa - 637; Fungi - 692; Plants - 1303; Viruses - 0; Other Eukaryotes - 5330 (source: NCBI BLink).Coding geneHOM03D001277 orphan gene
X AT1G17300unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17285.1); Has 27 Blast hits to 27 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D008301 orphan gene
X AT1G17310MADS-boxCoding geneHOM03D000038 ORTHO03D023214
X AT1G17330Metal-dependent phosphohydrolase; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metal-dependent phosphohydrolase, HD subdomain (InterPro:IPR006674), Metal-dependent phosphohydrolase, HD domain (InterPro:IPR003607); Has 1677 Blast hits to 1677 proteins in 841 species: Archae - 70; Bacteria - 1404; Metazoa - 0; Fungi - 90; Plants - 42; Viruses - 5; Other Eukaryotes - 66 (source: NCBI BLink).Coding geneHOM03D005556 ORTHO03D006081
X AT1G17340Phosphoinositide phosphatase family proteinCoding geneHOM03D000840 ORTHO03D000198
X AT1G17345SAUR-like auxin-responsive protein familyCoding geneHOM03D001342 ORTHO03D047552
X AT1G17350Probable complex I intermediate-associated protein 30Coding geneHOM03D004929 ORTHO03D006243
X AT1G17360BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1); Has 9949 Blast hits to 7480 proteins in 576 species: Archae - 12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants - 444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI BLink).Coding geneHOM03D003114 ORTHO03D004054
X AT1G17370oligouridylate binding protein 1B (UBP1B); FUNCTIONS IN: mRNA 3'-UTR binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 681 Blast hits to 681 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 681; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM03D001494 ORTHO03D000455
X AT1G17380jasmonate-zim-domain protein 5Coding geneHOM03D000851 ORTHO03D022896
X AT1G17390similar to RNase H domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G36905.1); similar to Ribonuclease H [Medicago truncatula] (GB:ABD28505.1); contains InterPro domain Ribonuclease H; (InterPro:IPR002156); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337)Transposon
V AT1G17400unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).Coding geneHOM03D002507 ORTHO03D033102
V AT1G17410Nucleoside diphosphate kinase family protein; FUNCTIONS IN: nucleoside diphosphate kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleoside diphosphate kinase, core (InterPro:IPR001564); BEST Arabidopsis thaliana protein match is: nucleoside diphosphate kinase 2 (TAIR:AT5G63310.1); Has 9030 Blast hits to 8806 proteins in 2558 species: Archae - 289; Bacteria - 4566; Metazoa - 1151; Fungi - 165; Plants - 382; Viruses - 117; Other Eukaryotes - 2360 (source: NCBI BLink).Coding geneHOM03D000794 ORTHO03D010023