Table Overview Functional Clusters: Thellungiella parvula top

Data Overview


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Cluster id E-value Cluster size Chromosome InterPro Description
CH_tpa_13.56049e-4515ch1-1IPR003863Protein of unknown function DUF220
CH_tpa_100.000000055262310ch1-2IPR024788Malectin-like carbohydrate-binding domain
CH_tpa_110.0000050329310ch2-2IPR000719Protein kinase domain
CH_tpa_120.00016307512ch7-4IPR000008C2 domain
CH_tpa_130.00022699614ch7-1IPR001810F-box domain
CH_tpa_140.0005561514ch7-4IPR001128Cytochrome P450
CH_tpa_22.93126e-2510ch6-1IPR027923Hydrophobic seed protein
CH_tpa_31.13649e-2315ch2-4IPR000157Toll/interleukin-1 receptor homology (TIR) domain
CH_tpa_47.23456e-2313ch2-4IPR017972Cytochrome P450, conserved site
CH_tpa_50.000000000036898913ch6-1IPR002902Gnk2-homologous domain
CH_tpa_60.00000000078027510ch1-1IPR023393START-like domain
CH_tpa_70.0000000041201619ch5-1IPR017441Protein kinase, ATP binding site
CH_tpa_80.0000000076877811ch7-4IPR002902Gnk2-homologous domain
CH_tpa_90.000000015165215ch7-6IPR001128Cytochrome P450

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
1GOPrimary GO data only.230800.001X152
2GOPrimary and orthology projected GO data.230800.001X233
3GOAll GO data.230800.001X267
4GOPrimary GO data only.101503000.001X17
5GOPrimary and orthology projected GO data.101503000.001X36
6GOAll GO data.101503000.001X34
7GOPrimary GO data only.230800.001V6
8GOPrimary and orthology projected GO data.230800.001V11
9GOAll GO data.230800.001V11
10GOPrimary GO data only.101503000.001V1
11GOPrimary and orthology projected GO data.101503000.001V4
12GOAll GO data.101503000.001V3
13InterProNo filter applied.230800.001X354
14InterProNo filter applied.101503000.001X14
15InterProNo filter applied.230800.001V14