Table Overview Functional Clusters: Solanum lycopersicum top

Data Overview


Click table-header(s) to enable sorting
Cluster id E-value Cluster size Chromosome MapMan Description
CH_sly_13.39163e-5130ch0117.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sly_107.58728e-2611ch1117.4.1hormone metabolism.cytokinin.synthesis-degradation
CH_sly_117.12485e-2310ch0726.9misc.glutathione S transferases
CH_sly_122.51478e-2210ch0528.1.3DNA.synthesis/chromatin structure.histone
CH_sly_136.78548e-2214ch0516.2.1.6secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT
CH_sly_143.77348e-2111ch0226.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sly_157.39062e-21150ch0035.2not assigned.unknown
CH_sly_161.60524e-2011ch1117.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sly_175.06113e-2010ch0129.5.1protein.degradation.subtilases
CH_sly_185.12998e-2010ch0211.9.2.1lipid metabolism.lipid degradation.lipases.triacylglycerol lipase
CH_sly_195.28643e-2010ch0534.13transport.peptides and oligopeptides
CH_sly_26.37626e-4217ch0926.9misc.glutathione S transferases
CH_sly_207.83036e-2011ch0826.10misc.cytochrome P450
CH_sly_211.31297e-1912ch121.1PS.lightreaction
CH_sly_224.85387e-19142ch0835.2not assigned.unknown
CH_sly_231.06061e-1811ch0217.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sly_243.48241e-18149ch0935.2not assigned.unknown
CH_sly_253.48241e-18149ch0035.2not assigned.unknown
CH_sly_261.12803e-1710ch0326.10misc.cytochrome P450
CH_sly_271.12803e-1710ch0726.10misc.cytochrome P450
CH_sly_287.39776e-1714ch0127.1.19RNA.processing.ribonucleases
CH_sly_291.00467e-1612ch0813.2.7amino acid metabolism.degradation.histidine
CH_sly_37.90845e-3917ch0829.5.1protein.degradation.subtilases
CH_sly_303.87274e-1615ch1229.4protein.postranslational modification
CH_sly_314.2417e-1613ch011.1PS.lightreaction
CH_sly_320.00000000000000173002136ch0335.2not assigned.unknown
CH_sly_330.0000000000000036666912ch0429.5.5protein.degradation.serine protease
CH_sly_340.00000000000000533204108ch0435.2not assigned.unknown
CH_sly_350.0000000000000065974115ch0726.2misc.UDP glucosyl and glucoronyl transferases
CH_sly_360.0000000000000078282410ch0417.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sly_370.0000000000000123146150ch0135.2not assigned.unknown
CH_sly_380.0000000000000148614ch021.1PS.lightreaction
CH_sly_390.000000000000014962930ch0420.1stress.biotic
CH_sly_41.62446e-3225ch0230.2.17signalling.receptor kinases.DUF 26
CH_sly_400.000000000000016302810ch0430.2.17signalling.receptor kinases.DUF 26
CH_sly_410.000000000000016302810ch0730.2.17signalling.receptor kinases.DUF 26
CH_sly_420.000000000000029602210ch0127.2RNA.transcription
CH_sly_430.00000000000016681425ch1020.1stress.biotic
CH_sly_440.000000000000256945142ch1135.2not assigned.unknown
CH_sly_450.00000000000043939710ch0229.5.11protein.degradation.ubiquitin
CH_sly_460.00000000000071948212ch0827.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
CH_sly_470.00000000000156625140ch0535.2not assigned.unknown
CH_sly_480.00000000000553586150ch1035.2not assigned.unknown
CH_sly_490.000000000005936511ch1230.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sly_52.29734e-3216ch0917.5.1hormone metabolism.ethylene.synthesis-degradation
CH_sly_500.0000000000290134148ch0135.2not assigned.unknown
CH_sly_510.00000000015586711ch0326.2misc.UDP glucosyl and glucoronyl transferases
CH_sly_520.00000000027459510ch0730.2.17signalling.receptor kinases.DUF 26
CH_sly_530.000000000366368143ch1235.2not assigned.unknown
CH_sly_540.0000000004432986ch0635.2not assigned.unknown
CH_sly_550.0000000015012421ch1028.99DNA.unspecified
CH_sly_560.00000000193516150ch0735.2not assigned.unknown
CH_sly_570.00000000721323130ch0135.2not assigned.unknown
CH_sly_580.0000000098628313ch0620.1stress.biotic
CH_sly_590.000000010600816ch0230.2signalling.receptor kinases
CH_sly_68.15831e-3215ch0829.3.4.3protein.targeting.secretory pathway.vacuole
CH_sly_600.0000000142483139ch0735.2not assigned.unknown
CH_sly_610.0000000193312ch0226.28misc.GDSL-motif lipase
CH_sly_620.00000002254910ch0926.10misc.cytochrome P450
CH_sly_630.000000032611410ch0326.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
CH_sly_640.000000054945410ch0226misc
CH_sly_650.000000058294411ch1126.2misc.UDP glucosyl and glucoronyl transferases
CH_sly_660.000000059165136ch0235.2not assigned.unknown
CH_sly_670.000000076978721ch0133development
CH_sly_680.000000082145310ch0127.3.67RNA.regulation of transcription.putative transcription regulator
CH_sly_690.0000005492210ch011PS
CH_sly_72.41231e-2912ch0129.5.4protein.degradation.aspartate protease
CH_sly_700.00000064113310ch0726.13misc.acid and other phosphatases
CH_sly_710.00000067676410ch0817.4hormone metabolism.cytokinin
CH_sly_720.0000014242612ch0310cell wall
CH_sly_730.0000024025217ch0430signalling
CH_sly_740.000003417837ch0430signalling
CH_sly_750.0000048134410ch1231cell
CH_sly_760.0000060271810ch0829.5.1protein.degradation.subtilases
CH_sly_770.0000068404811ch0126.8misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
CH_sly_780.0000094074171ch1235.2not assigned.unknown
CH_sly_790.00001022411ch1017.2.3hormone metabolism.auxin.induced-regulated-responsive-activated
CH_sly_83.56775e-2711ch0421.4redox.glutaredoxins
CH_sly_800.000010517111ch0430.2.11signalling.receptor kinases.leucine rich repeat XI
CH_sly_810.000010903310ch0511.8lipid metabolism.exotics(steroids, squalene etc)
CH_sly_820.000021305212ch0126misc
CH_sly_830.000025371810ch0329protein
CH_sly_840.000043971115ch0820.1stress.biotic
CH_sly_850.000046358811ch0529.4protein.postranslational modification
CH_sly_860.000085950416ch1116secondary metabolism
CH_sly_870.00016456710ch0127.3.99RNA.regulation of transcription.unclassified
CH_sly_880.0001756525ch0127RNA
CH_sly_890.00020598363ch1235.2not assigned.unknown
CH_sly_95.68916e-2712ch0116.1.5secondary metabolism.isoprenoids.terpenoids
CH_sly_900.00021704510ch0829.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
CH_sly_910.00021723669ch1027RNA
CH_sly_920.0002305940ch0335.2not assigned.unknown
CH_sly_930.00042117113ch0333.99development.unspecified
CH_sly_940.00052453816ch071PS
CH_sly_950.000648913ch0120stress
CH_sly_960.00068960711ch0234transport
CH_sly_970.00077710411ch0220.1stress.biotic
CH_sly_980.00083831610ch0627.4RNA.RNA binding

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
1GOPrimary GO data only.230800.001X440
2GOPrimary and orthology projected GO data.230800.001X496
3GOAll GO data.230800.001X649
4GOPrimary GO data only.101503000.001X117
5GOPrimary and orthology projected GO data.101503000.001X132
6GOAll GO data.101503000.001X174
7GOPrimary GO data only.230800.001V13
8GOPrimary and orthology projected GO data.230800.001V17
9GOAll GO data.230800.001V29
10GOPrimary GO data only.101503000.001V10
11GOPrimary and orthology projected GO data.101503000.001V14
12GOAll GO data.101503000.001V13
13InterProNo filter applied.230800.001X817
14InterProNo filter applied.101503000.001X76
15InterProNo filter applied.230800.001V25
17MapManNo filter applied.230800.001X496
18MapManNo filter applied.101503000.001X98
19MapManNo filter applied.230800.001V20
20MapManNo filter applied.101503000.001V15