Table Overview Functional Clusters: Beta vulgaris top

Settings

Data Overview


Click table-header(s) to enable sorting
Cluster id E-value Cluster size Chromosome InterPro Description
CH_bvu_11.10476e-4222Bvchr8.sca006IPR002902Gnk2-homologous domain
CH_bvu_108.01288e-19110039.scaffold00152IPR001929Germin
CH_bvu_119.67308e-1610Bvchr7_un.sca001IPR002401Cytochrome P450, E-class, group I
CH_bvu_120.000000000030667310Bvchr3.sca009IPR013210Leucine-rich repeat-containing N-terminal, type 2
CH_bvu_130.00000000065087713Bvchr6.sca002IPR010255Haem peroxidase
CH_bvu_140.0000000019812923Bvchr4.sca003IPR002885Pentatricopeptide repeat
CH_bvu_150.000000005214911Bvchr5.sca023IPR016196Major facilitator superfamily domain, general substrate transporter
CH_bvu_160.00000020481310Bvchr3.sca003IPR017853Glycoside hydrolase, superfamily
CH_bvu_170.00000040254816Bvchr4.sca004IPR002885Pentatricopeptide repeat
CH_bvu_180.00000070267611Bvchr2.sca018IPR014710RmlC-like jelly roll fold
CH_bvu_190.00000078064710Bvchr4.sca001IPR016040NAD(P)-binding domain
CH_bvu_26.63971e-3923Bvchr7.sca021IPR002182NB-ARC
CH_bvu_200.0000032701910Bvchr2.sca017IPR027417P-loop containing nucleoside triphosphate hydrolase
CH_bvu_210.0000045077210Bvchr5.sca022IPR012336Thioredoxin-like fold
CH_bvu_220.0000093984112Bvchr5.sca002IPR001128Cytochrome P450
CH_bvu_230.000093940510Bvchr1.sca001IPR011991Winged helix-turn-helix DNA-binding domain
CH_bvu_240.000111811Bvchr9.sca026IPR003591Leucine-rich repeat, typical subtype
CH_bvu_250.00035987110Bvchr7.sca001IPR027443Isopenicillin N synthase-like
CH_bvu_260.00036562810Bvchr6.sca003IPR013083Zinc finger, RING/FYVE/PHD-type
CH_bvu_31.63005e-2910Bvchr8.sca002IPR022740Polyphenol oxidase, C-terminal
CH_bvu_41.76494e-2912Bvchr9.sca026IPR003676Auxin-induced protein, ARG7
CH_bvu_51.58379e-2611Bvchr4.sca001IPR000490Glycoside hydrolase, family 17
CH_bvu_61.76035e-2210Bvchr4.sca001IPR000152EGF-type aspartate/asparagine hydroxylation site
CH_bvu_72.96155e-2010Bvchr3.sca005IPR000863Sulfotransferase domain
CH_bvu_81.60727e-1913Bvchr7.sca021IPR000823Plant peroxidase
CH_bvu_94.31865e-1911Bvchr3.sca010IPR002213UDP-glucuronosyl/UDP-glucosyltransferase

Experiments Overview

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal Cluster count
1GOPrimary GO data only.230800.001X237
2GOPrimary and orthology projected GO data.230800.001X315
3GOAll GO data.230800.001X375
4GOPrimary GO data only.101503000.001X37
5GOPrimary and orthology projected GO data.101503000.001X48
6GOAll GO data.101503000.001X56
7GOPrimary GO data only.230800.001V14
8GOPrimary and orthology projected GO data.230800.001V13
9GOAll GO data.230800.001V17
10GOPrimary GO data only.101503000.001V1
11GOPrimary and orthology projected GO data.101503000.001V2
12GOAll GO data.101503000.001V4
13InterProNo filter applied.230800.001X521
14InterProNo filter applied.101503000.001X26
15InterProNo filter applied.230800.001V17
17MapManNo filter applied.230800.001X1