Functional clusters   top

Information

Type
Mapman term
Identifier
29.5.11.4.2
Description
protein.degradation.ubiquitin.E3.RING

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana317CH_ath_1629200.0000000916875
Capsella rubellascaffold_517CH_cru_2098190.0000165223
Capsella rubellascaffold_617CH_cru_228550.0000471198
Chlamydomonas reinhardtiichromosome_1017CH_cre_41470.000103786
Citrus sinensisscaffold0001317CH_csi_235440.000974189
Citrus sinensisscaffold0014317CH_csi_126690.0000183437
Eucalyptus grandisscaffold_1017CH_egr_723570.000127075
Eucalyptus grandisscaffold_317CH_egr_65311740.0000253995
Eucalyptus grandisscaffold_517CH_egr_591550.00000616577
Eucalyptus grandisscaffold_318CH_egr_24311740.0000253995
Gossypium raimondiiChr0317CH_gra_146790.000000294014
Oryza sativa ssp. japonica117CH_osa_339590.000138236
Oryza sativa ssp. japonica417CH_osa_421450.00077357
Prunus persicascaffold_517CH_ppe_7210120.000000000000238851
Prunus persicascaffold_517CH_ppe_441440.000808568
Prunus persicascaffold_717CH_ppe_369570.000215602
Prunus persicascaffold_518CH_ppe_4710120.000000000000238851
Solanum lycopersicumch0117CH_sly_181660.000000174572
Solanum lycopersicumch0917CH_sly_165790.0000000797842
Solanum lycopersicumch1117CH_sly_276550.0000134107
Vitis viniferachr717CH_vvi_340570.000127368
Zea mays517CH_zma_89660.000000354064
Zea mays917CH_zma_519150.00000000478043

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V