Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR013525
Description
ABC-2 type transporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold0006913CH_atr_209450.000000546102
Arabidopsis lyratascaffold_513CH_aly_219450.000000344731
Arabidopsis thaliana313CH_ath_211450.000000353724
Brassica rapaA0413CH_bra_141440.000000155528
Capsella rubellascaffold_513CH_cru_228450.000000608881
Eucalyptus grandisscaffold_1013CH_egr_10565240.000110522
Eucalyptus grandisscaffold_813CH_egr_2758120.0000000000000156823
Eucalyptus grandisscaffold_913CH_egr_519550.00000000269863
Eucalyptus grandisscaffold_913CH_egr_1224330.000487916
Fragaria vescascf051316813CH_fve_3904120.000039046
Glycine maxGm0813CH_gma_120660.00000000000282027
Glycine maxGm1313CH_gma_1277130.00000000000895513
Glycine maxGm1313CH_gma_718330.000407597
Gossypium raimondiiChr0113CH_gra_510330.000313233
Gossypium raimondiiChr0513CH_gra_238590.000000151185
Oryza sativa ssp. japonica913CH_osa_5824160.0000614797
Populus trichocarpaChr0813CH_ptr_645330.000241175
Prunus persicascaffold_313CH_ppe_335440.000000412775
Ricinus communis2958813CH_rco_54660.000000000000924218
Solanum tuberosumchr0513CH_stu_257680.0000000000492603
Solanum tuberosumchr1213CH_stu_422580.000000053159
Thellungiella parvulach5-113CH_tpa_124450.000000687263
Theobroma cacaoscaffold_513CH_tca_270440.000000300605
Vitis viniferachr413CH_vvi_386450.00000655237
Vitis viniferachr613CH_vvi_2736190.000000223241
Vitis viniferachr913CH_vvi_1716217.40845e-34
Vitis viniferachr614CH_vvi_75101820.00000172576
Vitis viniferachr914CH_vvi_1716217.40845e-34

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V