Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR003340
Description
B3 DNA binding domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_713CH_aly_593490.000770081
Arabidopsis lyratascaffold_713CH_aly_1167120.000000000231454
Arabidopsis lyratascaffold_714CH_aly_45102050.000203531
Arabidopsis thaliana413CH_ath_329109.50133e-18
Arabidopsis thaliana414CH_ath_2810480.0000000000167277
Beta vulgarisBvchr2_un.sca00213CH_bvu_417330.000309115
Beta vulgarisBvchr9.sca02613CH_bvu_416330.000309115
Brassica rapaA0113CH_bra_129550.0000000777713
Brassica rapaA0413CH_bra_68660.000000000347357
Capsella rubellascaffold_713CH_cru_738110.00000000000017045
Capsella rubellascaffold_714CH_cru_50101720.0000376151
Citrullus lanatusChr113CH_cla_345330.00024016
Citrullus lanatusChr213CH_cla_168440.000000500844
Citrus sinensisscaffold0010913CH_csi_331330.000419013
Citrus sinensisscaffold0016713CH_csi_229139.90673e-17
Cucumis meloCM3.5_scaffold0000713CH_cme_161440.000000336286
Cucumis meloCM3.5_scaffold0004513CH_cme_2524100.0000699964
Eucalyptus grandisscaffold_413CH_egr_958460.0000379673
Eucalyptus grandisscaffold_713CH_egr_350790.00000000000207331
Eucalyptus grandisscaffold_713CH_egr_1314330.000879215
Eucalyptus grandisscaffold_913CH_egr_326780.00000000000046187
Eucalyptus grandisscaffold_913CH_egr_1123480.00017636
Eucalyptus grandisscaffold_714CH_egr_253102010.0000176489
Fragaria vescaLG213CH_fve_2478540.000000260945
Fragaria vescaLG513CH_fve_129670.000000000218595
Fragaria vescaLG713CH_fve_475470.000115474
Fragaria vescaLG715CH_fve_12470.0000392075
Glycine maxGm1013CH_gma_809330.000805161
Glycine maxGm1113CH_gma_386440.00000195138
Glycine maxGm1213CH_gma_810330.000805161
Glycine maxGm2013CH_gma_134660.0000000000112015
Gossypium raimondiiChr0313CH_gra_53992.74794e-18
Gossypium raimondiiChr0813CH_gra_205550.0000000204078
Gossypium raimondiiChr1213CH_gra_331440.00000587588
Gossypium raimondiiChr1313CH_gra_424460.0000876443
Gossypium raimondiiChr0314CH_gra_5410280.000000000000114025
Manihot esculentascaffold0323513CH_mes_162440.00000295182
Manihot esculentascaffold0670513CH_mes_74550.00000000980718
Manihot esculentascaffold0826513CH_mes_163440.00000295182
Manihot esculentascaffold1158413CH_mes_161440.00000295182
Medicago truncatulachr113CH_mtr_4913236.35383e-25
Medicago truncatulachr313CH_mtr_298690.000000000419983
Medicago truncatulachr313CH_mtr_1019132.82987e-17
Medicago truncatulachr413CH_mtr_1171330.00059185
Medicago truncatulachr713CH_mtr_745460.0000181884
Medicago truncatulachr114CH_mtr_5113236.35383e-25
Oryza sativa ssp. japonica1213CH_osa_440460.00000521094
Oryza sativa ssp. japonica313CH_osa_1078190.000000000000134
Oryza sativa ssp. japonica413CH_osa_841340.000896401
Oryza sativa ssp. japonica713CH_osa_471470.0000121437
Populus trichocarpaChr0913CH_ptr_448440.00000673137
Populus trichocarpaChr1213CH_ptr_228680.00000000232625
Populus trichocarpaChr1513CH_ptr_9610190.00000000000000106274
Populus trichocarpaChr1514CH_ptr_7210190.00000000000000106274
Prunus persicascaffold_113CH_ppe_759330.000915717
Prunus persicascaffold_413CH_ppe_113770.0000000000000825957
Prunus persicascaffold_413CH_ppe_559470.0000997501
Prunus persicascaffold_713CH_ppe_4310102.13358e-21
Prunus persicascaffold_414CH_ppe_110112780.0000475903
Prunus persicascaffold_714CH_ppe_4010102.13358e-21
Prunus persicascaffold_415CH_ppe_2450.00000334134
Ricinus communis2967613CH_rco_174440.000000463633
Ricinus communis3017013CH_rco_173440.000000463633
Ricinus communis3017015CH_rco_3330.0000865586
Solanum lycopersicumch0113CH_sly_803330.000873256
Solanum lycopersicumch0113CH_sly_804330.000873256
Solanum lycopersicumch0813CH_sly_579104.17012e-18
Solanum tuberosumchr0113CH_stu_825470.0000955805
Solanum tuberosumchr0113CH_stu_910480.000190712
Solanum tuberosumchr0113CH_stu_563440.00000275023
Solanum tuberosumchr0213CH_stu_1123330.000937961
Solanum tuberosumchr0813CH_stu_2515172.63843e-32
Solanum tuberosumchr0814CH_stu_2615172.63843e-32
Thellungiella parvulach4-213CH_tpa_1485100.00000244009
Thellungiella parvulach7-513CH_tpa_121580.000000545171
Theobroma cacaoscaffold_113CH_tca_88780.00000000000124986
Theobroma cacaoscaffold_10r13CH_tca_292580.000000787539
Vitis viniferachr313CH_vvi_332450.00000124018
Zea mays113CH_zma_283470.0000282222

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V