Functional clusters   top

Information

Type
GO term
Identifier
GO:0009535
Description
chloroplast thylakoid membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodachloroplast1CH_atr_130607.30343e-68
Amborella trichopodachloroplast3CH_atr_830593.35639e-38
Chlamydomonas reinhardtiichloroplast1CH_cre_129689.59966e-54
Chlamydomonas reinhardtiichloroplast2CH_cre_230686.49954e-36
Chlamydomonas reinhardtiichloroplast3CH_cre_330682.41796e-35
Chlamydomonas reinhardtiichloroplast9CH_cre_126685.62499e-29
Citrus sinensischloroplast8CH_csi_129762.28646e-31
Citrus sinensischloroplast9CH_csi_129762.62657e-31
Glycine maxchloroplast1CH_gma_130621.77963e-72
Glycine maxGm121CH_gma_65560.000000000266542
Glycine maxchloroplast3CH_gma_730611.44043e-36
Glycine maxGm127CH_gma_2560.0000000000500253
Lotus japonicuschloroplast1CH_lja_130639.14863e-69
Oryza sativa ssp. japonica101CH_osa_627100.00000000000268433
Oryza sativa ssp. japonica61CH_osa_181440.00000180359
Oryza sativa ssp. japonica71CH_osa_381330.000765828
Oryza sativa ssp. japonicachloroplast1CH_osa_130721.2628e-55
Oryza sativa ssp. japonica62CH_osa_313440.000132054
Oryza sativa ssp. japonicachloroplast2CH_osa_130579.66433e-45
Oryza sativa ssp. japonicachloroplast3CH_osa_130571.3235e-44
Oryza sativa ssp. japonicachloroplast4CH_osa_1391323.98218e-67
Oryza sativa ssp. japonica107CH_osa_165100.000000129398
Oryza sativa ssp. japonicachloroplast7CH_osa_125819.51313e-46
Oryza sativa ssp. japonicachloroplast8CH_osa_128811.69879e-37
Oryza sativa ssp. japonicachloroplast9CH_osa_128812.40658e-37
Oryza sativa ssp. japonicachloroplast10CH_osa_125819.51313e-46
Populus trichocarpachloroplast2CH_ptr_730562.40712e-38
Populus trichocarpachloroplast3CH_ptr_930564.56287e-38
Solanum lycopersicumchloroplast2CH_sly_230534.20021e-40
Solanum lycopersicumchloroplast3CH_sly_330536.21344e-40
Solanum lycopersicumchloroplast8CH_sly_128721.75243e-33
Solanum lycopersicumchloroplast9CH_sly_228722.71707e-33
Solanum tuberosumchloroplast1CH_stu_130694.99551e-63
Solanum tuberosumchr011CH_stu_234440.000000288911
Solanum tuberosumchloroplast2CH_stu_430574.87467e-39
Solanum tuberosumchloroplast3CH_stu_1030577.82814e-39
Solanum tuberosumchloroplast8CH_stu_128691.2781e-34
Solanum tuberosumchloroplast9CH_stu_128692.24166e-34
Vitis viniferachloroplast1CH_vvi_230631.27038e-63
Vitis viniferachloroplast2CH_vvi_530555.8338e-39
Vitis viniferachloroplast3CH_vvi_830558.63267e-39
Zea mayschloroplast1CH_zma_322811.31164e-38
Zea mays12CH_zma_1410103.40244e-16
Zea mays12CH_zma_6510400.000000220936
Zea mays13CH_zma_1410105.20478e-16
Zea mays13CH_zma_9210400.000000334025
Zea mays15CH_zma_910103.40244e-16
Zea mays15CH_zma_2110400.000000220936
Zea mays16CH_zma_910105.20478e-16
Zea mays16CH_zma_2710400.000000334025
Zea mayschloroplast8CH_zma_210310.00000000112395
Zea mayschloroplast9CH_zma_110310.00000000186164
Zea mayschloroplast11CH_zma_210310.00000000112395
Zea mayschloroplast12CH_zma_210310.00000000186164

Available child term results

GO term Description Number of clusters
GO:0030095chloroplast photosystem II1

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V