Functional clusters   top

Information

Type
GO term
Identifier
GO:0003700
Description
sequence-specific DNA binding transcription factor activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000453CH_atr_1108120.0000000624745
Amborella trichopodascaffold000456CH_atr_8810560.0006345
Arabidopsis thaliana43CH_ath_1769100.000000770001
Arabidopsis thaliana14CH_ath_107322020.000268864
Arabidopsis thaliana15CH_ath_101332020.0000848637
Arabidopsis thaliana16CH_ath_116332020.000123354
Arabidopsis thaliana46CH_ath_6510140.0000034091
Arabidopsis thaliana110CH_ath_22332260.00000856682
Arabidopsis thaliana111CH_ath_9332020.00000070984
Arabidopsis thaliana112CH_ath_10332020.000000942966
Beta vulgarisBvchr9.sca0261CH_bvu_1428250.0000813656
Beta vulgarisBvchr9.sca0262CH_bvu_2218250.000187113
Beta vulgarisBvchr7.sca0213CH_bvu_135790.000000965758
Beta vulgarisBvchr9.sca0263CH_bvu_17610330.0000133368
Beta vulgarisBvchr9.sca0266CH_bvu_3810330.0000133368
Carica papayasupercontig_813CH_cpa_121660.0000048856
Citrus sinensisscaffold000011CH_csi_43770.0000000379046
Citrus sinensisscaffold000012CH_csi_50770.000000114845
Citrus sinensisscaffold000014CH_csi_2610440.000469769
Eucalyptus grandisscaffold_11CH_egr_6314161.16949e-19
Eucalyptus grandisscaffold_71CH_egr_16310130.00000000000564231
Eucalyptus grandisscaffold_12CH_egr_9814169.93883e-19
Eucalyptus grandisscaffold_113CH_egr_4398100.0000000659323
Eucalyptus grandisscaffold_14CH_egr_5814161.16949e-19
Eucalyptus grandisscaffold_74CH_egr_11410130.00000000000564231
Eucalyptus grandisscaffold_15CH_egr_7114169.93883e-19
Eucalyptus grandisscaffold_75CH_egr_12310130.000000000025783
Fragaria vescaLG21CH_fve_103670.000000961191
Fragaria vescaLG22CH_fve_133670.00000264509
Fragaria vescaLG33CH_fve_6012220.0000000000193079
Fragaria vescaLG36CH_fve_2412220.0000000000193079
Fragaria vescaLG39CH_fve_19220.000000148659
Fragaria vescaLG312CH_fve_110420.0000091838
Glycine maxGm031CH_gma_2557110.0000874725
Glycine maxGm131CH_gma_134770.000000289038
Glycine maxGm191CH_gma_335550.000482048
Glycine maxGm032CH_gma_3317110.000199385
Glycine maxGm132CH_gma_175770.000000666201
Glycine maxGm192CH_gma_469550.000874867
Gossypium raimondiiChr011CH_gra_96880.00000000692131
Gossypium raimondiiChr012CH_gra_108880.0000000190059
Lotus japonicuschr32CH_lja_1328370.000220078
Lotus japonicuschr33CH_lja_1129370.0000522012
Malus domestica122CH_mdo_20710560.000256493
Malus domestica125CH_mdo_4210560.000256493
Medicago truncatulachr11CH_mtr_1648120.00000000433304
Medicago truncatulachr11CH_mtr_13210200.000000000163508
Medicago truncatulachr21CH_mtr_565440.000778571
Medicago truncatulachr61CH_mtr_15912460.00000000291091
Medicago truncatulachr71CH_mtr_4426130.000135943
Medicago truncatulachr12CH_mtr_16410200.000000000519171
Medicago truncatulachr12CH_mtr_2128120.0000000109583
Medicago truncatulachr62CH_mtr_21312460.0000000113621
Medicago truncatulachr72CH_mtr_5826130.000271187
Medicago truncatulachr14CH_mtr_7810200.000000000163508
Medicago truncatulachr64CH_mtr_8912460.00000000291091
Medicago truncatulachr15CH_mtr_8110200.000000000519171
Medicago truncatulachr65CH_mtr_9712460.0000000113621
Medicago truncatulachr26CH_mtr_236131040.000225095
Oryza sativa ssp. japonica41CH_osa_2359400.0000253132
Oryza sativa ssp. japonica42CH_osa_2699400.0000499966
Oryza sativa ssp. japonica113CH_osa_285550.0000334097
Oryza sativa ssp. japonica43CH_osa_4169400.000250381
Oryza sativa ssp. japonica44CH_osa_12411750.0000381816
Oryza sativa ssp. japonica45CH_osa_14011750.0000859341
Oryza sativa ssp. japonica46CH_osa_17511750.000581463
Physcomitrella patensscaffold_2591CH_ppa_56580.000527041
Populus trichocarpaChr141CH_ptr_276550.000116832
Populus trichocarpaChr032CH_ptr_279670.0000381951
Populus trichocarpaChr142CH_ptr_373550.00024528
Populus trichocarpaChr013CH_ptr_520550.000500189
Populus trichocarpaChr123CH_ptr_337660.0000130917
Prunus persicascaffold_11CH_ppe_156790.00000042422
Prunus persicascaffold_12CH_ppe_196790.00000114637
Prunus persicascaffold_72CH_ppe_303550.0000849496
Prunus persicascaffold_14CH_ppe_7810360.0000100976
Ricinus communis301741CH_rco_125550.0000318622
Ricinus communis301742CH_rco_149550.0000787244
Solanum tuberosumchr011CH_stu_11110110.00000000000180236
Solanum tuberosumchr011CH_stu_2678140.00000133748
Solanum tuberosumchr031CH_stu_269660.0000014428
Solanum tuberosumchr081CH_stu_343680.0000391269
Solanum tuberosumchr121CH_stu_378550.0000779691
Solanum tuberosumchr121CH_stu_5413131.02746e-18
Solanum tuberosumchr012CH_stu_3078140.00000348341
Solanum tuberosumchr012CH_stu_13210110.00000000000605806
Solanum tuberosumchr032CH_stu_298660.00000298375
Solanum tuberosumchr082CH_stu_416680.0000805788
Solanum tuberosumchr122CH_stu_5713134.99984e-18
Solanum tuberosumchr122CH_stu_429550.000142789
Solanum tuberosumchr013CH_stu_17711130.00000000000921577
Solanum tuberosumchr083CH_stu_674680.000288921
Solanum tuberosumchr014CH_stu_6910110.00000000000180236
Solanum tuberosumchr014CH_stu_11510310.00000518864
Solanum tuberosumchr124CH_stu_4513131.02746e-18
Solanum tuberosumchr015CH_stu_7010110.00000000000605806
Solanum tuberosumchr015CH_stu_13010310.0000166869
Solanum tuberosumchr125CH_stu_4713134.99984e-18
Solanum tuberosumchr016CH_stu_9211130.00000000000921577
Theobroma cacaoscaffold_93CH_tca_410560.000527457
Vitis viniferachr161CH_vvi_6011160.000000000000892266
Vitis viniferachr164CH_vvi_4011160.000000000000892266
Zea mays11CH_zma_172550.000146451
Zea mays21CH_zma_21911560.000681112
Zea mays12CH_zma_193550.000218321
Zea mays43CH_zma_166660.0000149653
Zea mays24CH_zma_3711560.000681112

Available child term results

GO term Description Number of clusters
GO:0001187RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity1

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V