View conserved binding sites


Gene
SL02G067660
Description
Phytoalexin deficient 4 (Fragment) (AHRD V1 **-- B2BDV5_ARALY)%3B contains Interpro domain(s) IPR002921 Lipase%2C class 3
Alias
Solyc02g067660.2.1;Solyc02g067660.2;Solyc02g067660.2.1;Solyc02g067660.2
Binding siteNameDescriptionLocationPosition
Motif_216PYRIMIDINEBOXHVEPB1Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA inductionUpstream-534
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-535
Upstream-536
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-535