View conserved binding sites


Gene
PPE_002G23350
Description
No description available
Alias
ppa012257m.g;ppa012257m;PAC:17655569;ppa012257m
Binding siteNameDescriptionLocationPosition
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-320
Upstream-321
Matrix_418KNAT6;KNAT2Not availableUpstream-320
Upstream-321
Motif_171TCP binding consensusfound enriched in peaks in chip-seq data for SEP3Upstream-295
Upstream-307
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-289
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-221
Upstream-222
Upstream-317
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-289
Motif_286SEBFCONSSTPR10ABinding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response elementUpstream-321
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-317
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-337
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-289
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-328
Motif_462TE2F2NTPCNAte2f-2 found in the promoter of tobacco PCNA gene; Located between -84 and -77; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-328