Matrix_101 | ERF5 | Not available | Upstream | -1314 |
| | | Upstream | -1315 |
| | | Upstream | -1418 |
| | | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_146 | ORA47 | Not available | Upstream | -1418 |
| | | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_151 | ASIL1 | Not available | Upstream | -1313 |
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -1330 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -1315 |
Matrix_165 | KNAT1 | Not available | Upstream | -1278 |
Matrix_234 | RAP2.3 | Not available | Upstream | -1418 |
| | | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -1315 |
Matrix_252 | RAP2.6 | Not available | Upstream | -1418 |
| | | Upstream | -1582 |
Matrix_256 | IXR11;KNAT5;KNAT4;KNAT3 | Not available | Upstream | -1277 |
Matrix_261 | ATERF-1 | Not available | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_272 | DEAR4 | Not available | Upstream | -1418 |
| | | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_287 | ERF2 | Not available | Upstream | -1314 |
Matrix_288 | RAP2.3 | Not available | Upstream | -1419 |
| | | Upstream | -1581 |
Matrix_295 | ERF1 | Not available | Upstream | -1420 |
| | | Upstream | -1582 |
Matrix_334 | AT3G23230 | Not available | Upstream | -1315 |
| | | Upstream | -1316 |
| | | Upstream | -1419 |
| | | Upstream | -1580 |
| | | Upstream | -1583 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -1314 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -1419 |
| | | Upstream | -1578 |
| | | Upstream | -1581 |
Matrix_360 | ORA59 | Not available | Upstream | -1582 |
Matrix_363 | RAP2.3 | Not available | Upstream | -1419 |
| | | Upstream | -1581 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -1314 |
| | | Upstream | -1315 |
| | | Upstream | -1582 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -1579 |
| | | Upstream | -1582 |
Matrix_378 | ATERF1 | Not available | Upstream | -1418 |
| | | Upstream | -1582 |
Matrix_387 | ORA47 | Not available | Upstream | -1330 |
| | | Upstream | -1331 |
| | | Upstream | -1577 |
Matrix_395 | AT1G19210;ORA47;AT4G31060;AT5G21960 | Not available | Upstream | -1314 |
| | | Upstream | -1315 |
| | | Upstream | -1330 |
| | | Upstream | -1331 |
| | | Upstream | -1578 |
Matrix_418 | KNAT6;KNAT2 | Not available | Upstream | -1277 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -1419 |
| | | Upstream | -1580 |
| | | Upstream | -1583 |
Matrix_433 | ATERF1 | Not available | Upstream | -1313 |
Matrix_448 | ATERF6 | Not available | Upstream | -1313 |
Matrix_473 | RRTF1 | Not available | Upstream | -1417 |
| | | Upstream | -1418 |
| | | Upstream | -1582 |
Matrix_482 | AT2G25650;AT4G00270 | Not available | Upstream | -1316 |
| | | Upstream | -1317 |
Matrix_484 | ATERF13 | Not available | Upstream | -1582 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -1314 |
Matrix_59 | AT4G00238;AT4G00250 | Not available | Upstream | -1313 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -1419 |
| | | Upstream | -1580 |
| | | Upstream | -1583 |
Motif_12 | CEREGLUBOX2PSLEGA | cereal glutenin box in pea legumin gene (legA); sequence homologous to the cereal glutenin gene control element (-300 element) | Upstream | -1324 |
Motif_136 | SEF4MOTIFGM7S | SEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4) | Upstream | -1285 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -1339 |
Motif_192 | BOXLCOREDCPAL | Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro | Upstream | -500 |
| | | Upstream | -684 |
Motif_193 | GLK1 | GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis | Upstream | -521 |
| | | Upstream | -850 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -3 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -1339 |
Motif_249 | DPBF1&2 binding site motif | A novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid system | Upstream | -195 |
| | | Upstream | -676 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -1339 |
Motif_382 | CATATGGMSAUR | Sequence found in NDE element in soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness | Upstream | -3 |
Motif_419 | MYB4 binding site motif | Not available | Upstream | -259 |
| | | Upstream | -462 |
| | | Upstream | -684 |
| | | Upstream | -696 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -1348 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -1294 |
| | | Upstream | -1349 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -1078 |
| | | Upstream | -1207 |
| | | Upstream | -1222 |
| | | Upstream | -1224 |
| | | Upstream | -1226 |
| | | Upstream | -1228 |
Motif_70 | CANBNNAPA | Core of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressor | Upstream | -267 |
| | | Upstream | -391 |
| | | Upstream | -464 |
| | | Upstream | -740 |