View conserved binding sites


Gene
BR04G05010
Description
No description available
Alias
Bra014850;Bra014850
Binding siteNameDescriptionLocationPosition
Matrix_130TCP16Not availableUpstream-180
Matrix_183BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-115
Upstream-141
Matrix_186FHY3Not availableUpstream-115
Upstream-141
Matrix_216TCP16Not availableUpstream-180
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsUpstream-180
Matrix_294MEE35Not availableUpstream-180
Matrix_49FHY3/FAR1Not availableUpstream-112
Upstream-138
Matrix_507TCP3Not availableUpstream-322
Matrix_77PRR5Not availableUpstream-114
Upstream-140
Upstream-278
Motif_153MARABOX1A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)Downstream2004
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-116
Upstream-142
Upstream-247
Upstream-280
Upstream-281
Upstream-390
Upstream-768
Upstream-791
Upstream-792
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-117
Upstream-143
Upstream-1140
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisDownstream2003
Downstream1999
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisDownstream2004
Downstream2000
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-989
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionUpstream-67
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-171