View conserved binding sites


Gene
AT3G15630
Description
No description available
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-1532
Matrix_113ABI5Not availableUpstream-1532
Matrix_122ABF1;AREB2Not availableUpstream-1532
Matrix_129ABF1Not availableUpstream-1533
Matrix_134ABF1Not availableUpstream-1533
Matrix_192FHY3/FAR1Not availableUpstream-1530
Matrix_264ATAREB1Not availableUpstream-1530
Matrix_338AP2Not availableUpstream-1530
Matrix_356PRR5Not availableUpstream-1530
Matrix_403BZR1Not availableUpstream-1531
Matrix_443AGL15Not availableUpstream-1531
Matrix_456bZIP60Not availableDownstream775
Matrix_480BES1Not availableUpstream-1532
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-296
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-240
Upstream-292
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-291
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1534
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsUpstream-292
Motif_244ABRE-like binding site motifNot availableUpstream-436
Upstream-1532
Motif_307TATCCAYMOTIFOSRAMY3DTATCCAY motif found in rice RAmy3D alpha-amylase gene promoter; a GATA motif as its antisense sequence; TATCCAY motif and G motif are responsible for sugar repressionUpstream-100
Upstream-289
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-436
Upstream-1534
Upstream-1557
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-1532
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-101
Upstream-290
Upstream-426
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-1532
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneUpstream-292