View conserved binding sites


Gene
AT2G42280
Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Alias
FBH4;Q66GR3
Binding siteNameDescriptionLocationPosition
Matrix_138RRTF1Not availableUpstream-411
Upstream-1648
Upstream-1649
Matrix_146ORA47Not availableUpstream-1647
Upstream-1648
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-1648
Upstream-1649
Matrix_272DEAR4Not availableUpstream-1647
Upstream-1648
Matrix_282bZIP60Not availableUpstream-1556
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-1648
Upstream-1649
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-1616
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsUpstream-1615
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteUpstream-462
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-332